Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KKLSRVADIVYIVDTFLIPPLHPLKKQHPKVAKFLKVQLVFDLISLFIFATHQLLLLEDGSFGKHYFKRKTKRCSKFSCSRCNANAHHPKWFKFKHSLLCLGTFCFGVYSLVKINKFFKTDQTVDLNRLLELFFWQLNAILNMKLFAFYGDHLESHSAPLDV |
1 | 5uj9A3 | 0.06 | 0.06 | 2.67 | 0.77 | SPARKS-K | | SMIPQVIKMFMGSLFNVIGACIIILLATPMAAVIIPPLGLIYFFVQRFYVASSRQLKRLESVSRSPVYSHFRFIRQSDLKVDENQKAYYPSIVANRWLAVRLECVGNCIVLFASLFAVISRHSLSAGLVGLSVSYSLQVTTYLNWLVRMSSEMETNIVAVER |
2 | 5doqA2 | 0.11 | 0.10 | 3.60 | 0.76 | FFAS-3D | | -KVAHVLATSYMTSAFVLASIHLWKGNRHIYHRALHLTMKTAFIFSVASASGKFLAEYQEEDNEVKYALEIPYALSILANDIPEDERPPLYIHYLFDVMVTIGVFLMVVAAVYWLGSIFRWKWTAKNWFFGLLVAGGPLAMIAIEAGWYLAEV--------- |
3 | 6qp6A | 0.12 | 0.10 | 3.72 | 0.28 | HHpred | | ------------GQILMCPQCDR-LCRLNITCESSKKDSFGTLIFAVFMGVWVTLFWKRRQAELE-YEWDTVELQQEEQARPEYEAQCTTCGKCIRVTLCILLIIASVIGIIVYRLSVFSTT-LTPQMATSITASIISFIIIMILNTIYEKNFELPRT---- |
4 | 5kbwA | 0.13 | 0.12 | 4.29 | 0.70 | MUSTER | | KKISFVGIFSALA-EFPIFPQASFLKYDPSEIPALIVSFLLGPGVGMFVVLVKDILFF-GDPVGIAMNAVLGMSFVGIAGLIYHRNKSRATAIKGMIVATLFATAFALGLNALIVPLYF---EAPFELYLKFFPFILAFNLVKFGIDSVVTFFVYK--KVSS |
5 | 4he8G | 0.09 | 0.08 | 3.09 | 0.89 | CNFpred | | FWVFLGFALAFAIKTPLFPLHAWLPPFHQENHPSGLADALGTLYKVGVFAFFRFAIPLAPEGFAQAQGLLLFLAALSALYGAWVAF-----AKDFKTLLAYAGLSHMGVAALGVFSG-------TPEGAMGGLYLLAASGVYTGGLFLLAGRLYERTGTLEI |
6 | 1vt4I3 | 0.18 | 0.14 | 4.62 | 0.66 | HHsearch-2 | | YALHRSIVDHTFDSDDLIPPYLD-QYFYSHIGHHLKNIEHPERMTLF-RMVFLDFRFLEQKIRH------DSTAWNASGSILNTLQQL-K--------------------------FYKPYICDNDPKYERLILDFLPKIEENLICSKYTDLLIALMAEDEA |
7 | 6cc4A4 | 0.13 | 0.12 | 4.28 | 0.76 | Neff-PPAS | | DRLMEFPSGVLGVALGTIPSLSKSFASGDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTVSLFQYGKFTAFDALMTQRALIAYSTPQPGWMAFLLRLVVAVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLG--------FKV |
8 | 1xs0C | 0.11 | 0.05 | 1.80 | 0.55 | HHsearch | | -----------------DLTISSLA-KGETTKAAFNQMVQIAVMWSEKNQMTG--LFSTIDEKLT-WLNVNDALSKLFAALTGSLENHPDGFNFRSH----------------------------------------------------------------- |
9 | 6ei3A | 0.06 | 0.06 | 2.67 | 0.64 | SP3 | | DPHGFGAVVRSALLAHAPGQGRPGLALAAISVLLALACLGLTEQLGLVICLCMALVLLLAGIGGGTWWQLERARGTHPDAAVDGVRALLRVLVIFALVTPFFSLFDQKASTWVLQGREMRMPAWFTASQMQALNPLLVMLLIPFNNLVLYPLLRRLGWEPTS |
10 | 5h7cA3 | 0.05 | 0.05 | 2.33 | 0.69 | PROSPECTOR2 | | DSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKSELVNEIVKQLAEVAKLVIYIVKILAELAKQSTDSELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLPNLNEEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQALAEKAKEA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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