Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | QKKKQQTPSSAKVMELVSTKRQGVTKQVKRLQGRLGPGKSKATVKDKRVKSAVEEFRKKQGKSHMSDNLKYFMETGYKATDSDTSKILSHNSGRQSRNRPEQPAKKAKESQSLFTEEEFQQFQKEYF |
1 | 4qiwF | 0.09 | 0.08 | 3.02 | 0.75 | SPARKS-K | | -------MIGRKKLEEHYITIAEAKELLERRHAEGLAENPEEPMFY-EARVSLEHAERFAKLKQARELKEKLMGLFDWINERIAAKLVDILP-----EDYLDIRVIFAKEEYMPTPEEAEEIIKVID |
2 | 6igzL | 0.10 | 0.09 | 3.24 | 0.66 | FFAS-3D | | -MLETPVTSAPIVAGFLSNLRTGVSPLLRGVE-----------IGLTHGFLVAGPFIKLRDAAGGAAETAGCLSGALLVIILTACLTIATFEDDEPQIGVKTLSGRDIARDPLQSAEGWNEFTSGWL |
3 | 6g3bA | 0.16 | 0.14 | 4.74 | 0.36 | HHpred | | -------PDAASAL-SIVGTEEYIIASATNFKGRDPTPLPPSTIPDEMVSVILNKYFE-VPSEEL-EKAEEWHRLS-MGAENIVGDLLERPSGSQVAIRHGTPDKPSLEGKENLSEKGFKLYVEKYL |
4 | 2otoB | 0.10 | 0.10 | 3.76 | 0.79 | MUSTER | | QNIRLRHENKDLKARLENAEVAGDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEK |
5 | 3eijA | 0.04 | 0.02 | 1.24 | 0.48 | CNFpred | | ------------------------------------------------LTPIIQEYFEHG---DTNEVAEMLRDLNLGEKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTTDVEKSFDKLL |
6 | 1vt4I3 | 0.07 | 0.06 | 2.65 | 0.49 | HHsearch-2 | | IVDHYNIPKTFDSDDLIPPYLDQYYSHIHHLKNIEHPERMTLFRMV---FLDFRFLEQKIRHGSILNTLQQLKPYICDNDPKYERLVNAILPKIEENLICSKY---TDLLRIALMAEDEAIFEEAHK |
7 | 1w9rA | 0.09 | 0.09 | 3.26 | 0.94 | Neff-PPAS | | HMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP---------- |
8 | 5jcsr2 | 0.16 | 0.09 | 3.16 | 0.54 | HHsearch | | ---------------------KG---------------VNM------AAKSLIALYRDVQE---AKKGIELLAKWKKNWVVSEEDDVEAAASAKLQ-ELRNEES--VAVDASTLTEERLQKVLEG-- |
9 | 2pmsC | 0.08 | 0.07 | 2.76 | 0.64 | SP3 | | --GSHMDAEEVAPQAKIAELENQVHRLEQELKEIDEAPLQSKLDAKKAKLSKLEELSDKIDE--LDAEIAKLEDQLAEEEDYFKEGLEKTIAAKKAELEKTEADLKKAVNE---------------- |
10 | 1w9rA | 0.05 | 0.05 | 2.16 | 0.60 | PROSPECTOR2 | | GSHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP--------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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