Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | KFQQKALKQTKQKKSKSAEFLMVKEERAATEGIENPAFNISSTDLSAYQPSEEKVIRHDKPDSTLAAHQQKLRLQAHAEPRGNEYSRNYFDPLMDEEINPRQCGMEVS |
1 | 5yz0C | 0.14 | 0.14 | 4.71 | 1.14 | SPARKS-K | | KEKMKVMEEEVLIKNILRDSLHQTESVLEEQRRS----HFLLEQEKTQALSDKEKEFSKKLQSLQSELQFKDAEMNELRTKLQTSERNKLAAPSVSHVSPRKNPSVVI |
2 | 2w0cT | 0.20 | 0.19 | 6.20 | 0.38 | FFAS-3D | | -FYQKADNAAKTATKPIADFL--AELQFLVNGSNYVKFPNAGFVLTRDALQDDFIAYDDRIKAWLGTHDRHKDFLAEILDHERRVKPVY-RKLIGNIIDASTIGVEL- |
3 | 1f6dA1 | 0.24 | 0.19 | 6.06 | 0.26 | HHpred | | ----HALAKTAQHRE-LDQVL-------KLFSI-VPDYDLNIQGLT-EIEGLKPILAEFKPDTTLAAFYQRIPV---GHVEAGLRTGDLYSP-WPEEANRTLTGH--- |
4 | 1w9rA | 0.08 | 0.08 | 3.25 | 0.90 | MUSTER | | MPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKRKKAEEEAKRKAAEEDKVKEKP |
5 | 4bg2A | 0.21 | 0.06 | 2.06 | 0.69 | CNFpred | | ----------------------------------------------------------------VRTHQEAFDVKP-------TFPLPLFEEAILE---EGSCSVESS |
6 | 2pffB | 0.19 | 0.19 | 5.99 | 0.65 | HHsearch-2 | | KLKEKIFKEINE-HSTSYTFRSEKFTQPALTLMEKPAFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELRSNYGMIAINPGRVFSQEALQYVVERV |
7 | 3hgfA | 0.10 | 0.08 | 3.12 | 0.97 | Neff-PPAS | | -------PMVKEIEKKIENITKIDKKKYIYDNMKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKI-------KKKSENMIKSMEKYIKDLDEIKEQSPKAE |
8 | 1xutA | 0.15 | 0.05 | 1.56 | 0.30 | HHsearch | | --------------------------------------------------------------------------GSPWSLSCRKEQGKFYDHLLRDGQHPKQCAYFC- |
9 | 2d05A2 | 0.15 | 0.14 | 4.68 | 0.65 | SP3 | | VYIRYSVEQARQRGFTSAVTIGSFVDTALNQGATGGS--DTLQGLLARSGSSSNE------KTFMKNFHAKRTLVVDTNPNGKNRVKQWDTLVDMGKMNLKNVDSEIA |
10 | 1w9rA | 0.05 | 0.05 | 2.25 | 0.49 | PROSPECTOR2 | | GSHMEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRAEEEAKRKAAEEDKVKEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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