>PF15667 (247 residues) QHSKPCVGRGRVCYAKFINTNARTCNEPVPYIDPKKGPEEQGDWWSHGKGLEHPFQPPYD TKSTQRSDFQKPTCPLVLPVKHSKLQKPSCGIVPLASPDASAELQKNFIERISFIHQYDA RKTPNEPIRGKRHGVFVQTEIKPGSRPIVPKGTEVFLNAPGSCWSEQSEKTEKGNSAESK MISPSLCRQNSLELLETKTHLSETDVREAAKACPRSPETREKTADVFQTAAVNALLTRHD PLNPPIK |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | QHSKPCVGRGRVCYAKFINTNARTCNEPVPYIDPKKGPEEQGDWWSHGKGLEHPFQPPYDTKSTQRSDFQKPTCPLVLPVKHSKLQKPSCGIVPLASPDASAELQKNFIERISFIHQYDARKTPNEPIRGKRHGVFVQTEIKPGSRPIVPKGTEVFLNAPGSCWSEQSEKTEKGNSAESKMISPSLCRQNSLELLETKTHLSETDVREAAKACPRSPETREKTADVFQTAAVNALLTRHDPLNPPIK | |||||||||||||||||||
1 | 1dgiR | 0.07 | 0.07 | 2.96 | 1.66 | Neff-PPAS | --QVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDEGNYTCLFVTF-PQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAHSDLGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGPLPPFAVAQGAQLLIRPVDKPIN | |||||||||||||
2 | 4k0mC | 0.06 | 0.05 | 2.08 | 1.13 | PROSPECTOR2 | KVYTIDEAARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAA-----------------AAAAAAAAAAAA-----------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----------------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||||||
3 | 5a9qA | 0.09 | 0.08 | 2.94 | 0.94 | SPARKS-K | IAVIENSESLDCQLLAVTHAGVR------LYFSTCPFRARPNTRLPPGFSASSTVEKPSKVHRALYSK------GILLMAASENDNDILWCVNHDTFP-----FQKPMMETQMTAHSWALSAIDTPLNKDHIPITDSPVVV---QQHMLPPKKFVLLSAQGSLMFHKL----------RPVDQLRHLLVEIERFFKLHQEDQACATCLILACSTCDRE----VSAWATRAFFRYGGEAQMRFTTLPV | |||||||||||||
4 | 1j5aK | 0.07 | 0.05 | 1.96 | 0.43 | FFAS-3D | -----------------------------------------------------------------------------AQINVIGQNGGRTIELPLPEVNS-----GVLHEVVTWQLASRRRGTASTRTRAQVSK----TGRKMYGQKNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLP | |||||||||||||
5 | 1dlqA | 0.13 | 0.11 | 3.65 | 0.35 | HHpred | -------------------HYLDMRMDAEDENATPRTI--EGPLYVAGAPESV-----GYARMDDGSDPNGHTLILHGTIF-----DADGKPLP-----------NAKVEKGFYSHFDPTGEQQAFNMRRSINGQYRVRTILPAGYGCPPEGPQQLLNQLGRHGNRPAHFSADGH---RKLT-TQINVAGD-PYTYDDFAYATREG-LVVDAVEHTDPKANDVEGPFAEMVFDLKLTRVDGVDQVVD | |||||||||||||
6 | 1kanA | 0.11 | 0.10 | 3.48 | 0.75 | MUSTER | NGPIIMTREERM---KIVHEIKE-------RILDKYGDDVKA--LGRQTDGPY-------------SDMSTEEAEFSHEWTTGE-WKVEVNFYSE------EILLDYASQVESDWPLTHGQFFSILPIYDS-GGYL--EKVYQTAKSVEAQKHDAICALIVEELFEYAGKWRNIRVQGPTTFLPSLTVQVAMAGAMLRICYTTSSVLTEAVKQSDLPSGSGQLSDSEKLLEWNGIQEWTERHGYIVD | |||||||||||||
7 | 2pffB | 0.16 | 0.15 | 4.98 | 0.83 | HHsearch-2 | LNILEWLENPSNTPDKLIPISLIGVIQLAHYVVTAKLLAETDSWESNTSLPNEGVPSPMNLTQEQVQDYVNKTNSPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLLRKAKAPSGL-DQSRI-PFSERKLKFSNRFLPVASPFHSHLLVPAS--D-------LINKDLVKNNVSFNAKDIQI-PVYDTFDGSDLRVLSGSISER----IVDCIIRLPVKWETTTQFKATHGVRVIVAGTLDINPDDD | |||||||||||||
8 | 6e5p2 | 0.07 | 0.06 | 2.62 | 1.57 | Neff-PPAS | --VESGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVAS-ISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPS--------VFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTV-------------PSSSLGTQTKPSNTKVDKKVEPKS--------- | |||||||||||||
9 | 2ky9A1 | 0.25 | 0.06 | 1.88 | 0.31 | HHsearch | -----------------------------------------------------------------------------------------------------------------YVVSYTPT-NGGQ--RVDHHKWVIQEEIKDAGDKTLQPGDQVILEASHMKGM-------KGATA--EIDSA--------------------------------------------------------------- | |||||||||||||
10 | 5i2aA | 0.17 | 0.10 | 3.32 | 0.61 | SP3 | --------------------------------------------------------------------------------------------YDSTPIAKSDRIKRLVDHLYAKMPEIEAKATEGQPVKAR---AFLPIIIRPESTTIAPRGCQTYPEF-SYEWLEAEFETVETRSADPFYISEET----KKRLLAADAYWKGKTTSELATSYMAPETLRAMKHNFFTPGNYFYNGVGH--VTVQYE | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |