Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | EPPKWVKKVLKQKTKWDWDANAKKYEKKQKEKKAKDAAKKAAKVGAAAGAGYIVYRGVRMAPSLLPPLWPTLPANLVIP |
1 | 5j1fA2 | 0.03 | 0.03 | 1.66 | 0.72 | SPARKS-K | | LAWQSLRRDVQLIRSWSLATFRTLK--PEEQRQALHSLELHYQAFLRDSQDAGGFGPEDRLMAEREYGSCSHHYQQLLQ |
2 | 2np9A1 | 0.20 | 0.16 | 5.28 | 0.44 | FFAS-3D | | -----LWAALTEAAASVEKLLATLPEHGARSSAERAEIAAAHDAARALRVRFLVYDLVEAAATAFPGLVPT-------- |
3 | 5d98A | 0.15 | 0.11 | 3.86 | 0.32 | HHpred | | SFPRWFNAEWMWADLTGWVPM---AEPPANEDYAEHLNKTMEGVLQGTNCAREMGKCILTVGALM-------------- |
4 | 4fzlA1 | 0.13 | 0.13 | 4.39 | 0.97 | MUSTER | | -GQNPVATVLLLQGDLYCSPNCLATFQDQARRDSFGIQSKVALKTFAAADQREAELRTAYNEIATDIRSQQINENIIK- |
5 | 5gl7A | 0.15 | 0.13 | 4.24 | 0.53 | CNFpred | | TISRHGNQYIQVNEPWKRIKG--------------SEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLP |
6 | 6ab7A | 0.18 | 0.18 | 5.77 | 0.47 | HHsearch-2 | | GFPTWFNEEWLWASKGDWIPMAEMPPCKNMEDYAKKMCEELESKIQGTNCAREMSKLIHTIGSLHTEC-RNFPGKVIVP |
7 | 5cwlA1 | 0.08 | 0.08 | 2.97 | 0.91 | Neff-PPAS | | -TTEDERRELEKVARKAIEAAREG-----NTDEVREQLQRALEIARESGTTEAVKLALEVVARVAIEAARRGNTDAVRE |
8 | 1rhzB | 0.23 | 0.16 | 5.15 | 0.34 | HHsearch | | QKIEQLKEFIEEC-RRVWLVLK---------KPTKDEYLAVAKVTALGIIGYIIHVPATYIKGILK------------- |
9 | 4fzlA1 | 0.15 | 0.15 | 5.09 | 0.74 | SP3 | | MQNPVATVLLLQGDLYCSPNCLATFQDQARRDSFGIQSKVALKTFAAADQREAEGRDLRTAEIATDIRSQQINENIIK- |
10 | 4fzlA1 | 0.13 | 0.13 | 4.42 | 0.42 | PROSPECTOR2 | | GMQNPVATVLLLQGDLYCSPNCLATFQDQARRDSFGIQSKVALKTFAAADQREAELRTAYNEIATDIGRSQQINENIIK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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