>PF15642 (386 residues) LKEHFKTLATSSTPEAWKAEVPVKNVEQTLSVTEQEALQQADKIVLDYNAKYRQSVQNLS RFSHVKQKFSKVFSKTAQVTKDVVLGPEINSLIHFQQQVNQAYGSEVMKLDQGRMERMHK ERLTELTTSHQQKEKGLEIKRGRIQAQLRVAPQRRLELMREEQFLVNQLIESEEMYQLTL KRLQNPAQTALEDFYDWKRSVFVDFTKLHLGNHFITYEALALGTVARKPEFYEQALQGST AIGSVLADAFLPLGGLLGNVIGGIAGKGAELYADKQIRIKAAKIGSLYGYRGLEGMVEVT REVANGLMFRLKDVIIDLTPESLDKLAKVATTQMIDYALKQWEANATQTITAANLLLRGT QHQPSWFKSFTQNTSIELEDGRFVDG |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | LKEHFKTLATSSTPEAWKAEVPVKNVEQTLSVTEQEALQQADKIVLDYNAKYRQSVQNLSRFSHVKQKFSKVFSKTAQVTKDVVLGPEINSLIHFQQQVNQAYGSEVMKLDQGRMERMHKERLTELTTSHQQKEKGLEIKRGRIQAQLRVAPQRRLELMREEQFLVNQLIESEEMYQLTLKRLQNPAQTALEDFYDWKRSVFVDFTKLHLGNHFITYEALALGTVARKPEFYEQALQGSTAIGSVLADAFLPLGGLLGNVIGGIAGKGAELYADKQIRIKAAKIGSLYGYRGLEGMVEVTREVANGLMFRLKDVIIDLTPESLDKLAKVATTQMIDYALKQWEANATQTITAANLLLRGTQHQPSWFKSFTQNTSIELEDGRFVDG | |||||||||||||||||||
1 | 4dylA | 0.11 | 0.09 | 3.34 | 1.18 | FFAS-3D | ---------------GFSSELCSPQGHGVLQQMQEAELRLLEGMRVKSDREYAGLLHHMAEITSQTEGLSRLLRQHAEDLNSGPLSK-LSLLIRERQQLRKTYSEQWQQLQQ-ELTKTHSQDIEKLKSQYRALARDSAQAKRKYDKAKDKYVRSLWKLFAHHNRYVLGVRAAQLHHQ---HHHQLLLPGLLRSLQDLHEEMACILKEI-----LQEYLEISSLVQDEVVAIHREMAAAAARIQPEAEQGFLRVQHTLTSVTDELAVATEMVFRRQ---------------EMVTQLQQELRNEEENTHPRERVQLLGKRQVLQEALQGLQVALCSQAKLQA-------QQELLQTKLEGPGEPPP--------------------- | |||||||||||||
2 | 6ek4A | 0.08 | 0.07 | 2.75 | 1.31 | PROSPECTOR2 | V------------------VYPEINVKTL--SQAVKNIWRLSHQQKSGIEIIQEKTLRISLSRDLDEAARASVPQLQTVLRQLPPQDYFLTLTEIDTELEDPELRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVS-NVVILERLESSLKEEQERK-AEIQADIAQQEKNKAKLVVDRNKIIESQDVIRQYNLAD----MFKDYIPNISDLD--KLDLANPKKELIKQAIKQGVEIAKKILGNISKELADARAKLDERINQINKDCDDLKIQLKG--------VEQRIAGIEDVHQIDKER---------TTLLLQAAKLEQANIFAKQLQNTIDGKIDQQDLTKIIHKQLDFLDDLALQYH----------SMLLS | |||||||||||||
3 | 4bujB | 0.09 | 0.09 | 3.51 | 0.77 | SPARKS-K | AKQELTNKLDPDNYFAHKALSSLPASNNVSSNRNLERATNHYVSAAKLVPDNLLAWKGLFLLFRTYDEYFDLCGQYADALLKQEQVELINDIKLLKKTCQKAFYQHLSLMAETIGRTPQDALLNLIKILSNIETTEIGKTLSQNRLKLASDPDYQIKLNSFSWEIIKN-SEIDQLYNQLVNILADIENQWLEYRIKVLKSMFTKVKEMVEDMVLKYFEWTDYEDLDNMDPLIIKYFKKDPLAMILYSWLSSKLSKYDIKSLELLEEEVVTVLTEKNNILAHRILCQYYLLTKYEAALPYIKNGISLIAYNIKDLGVHL--PLTKREFSLDLATVYTYALKLYDNILSNIMGKGIIFIERKNWKDTLLTQVHEQSPNNLEVLSELSW | |||||||||||||
4 | 5j1iA | 0.13 | 0.11 | 3.66 | 1.14 | FFAS-3D | ----------------------LKDIRLQLEACETRTVHRLRLPLDEPARECAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLASPAAPTLRSELELTLGKL-EQVRSLSAIYLEKL--KTISLVIRGTQGAEEVLRAHEEQLKEAQAVPATLP-ELEATKASL-KKLRAQAEAQQPTFDALRDELRGAQEVGERLQQRHGVERWRERVAQLLERWQAVL-AQTDVRQRELEQLGRQLRYYRESADP--------LGAWLQDARRRQEQIQAMDSQAVREQ----------LRQEQALLEEIER-------------HGEKVEECQRFA-KQYINAIKDYELQ--------LVTYKAQLEKVQSGSESVIQEYV----------- | |||||||||||||
5 | 6h7wB | 0.13 | 0.08 | 2.60 | 0.38 | HHpred | --KLFLESE--SFNIDVKHKNKFVEQDDWFHD-RRVYLDALENQLKALLKAMDNMVAQRKAMAEAAADFSASLHALSTVELSPTLSGPLDALSELQLAIRDVYERQAQQGIIIEEYIRLISQRQKAFHSWHSAESELMKKKAAQDKLLRTQQDRLNQVNAEVIDAERKVHQARLLFEDM----GRLLRSELDRFEREKVEDFKSGVETFLESAVEAQKELI--------EKWETFLMQ---------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5h7cA | 0.13 | 0.12 | 4.23 | 0.85 | MUSTER | QQNAFYEILHLPNLNEEQRNAFIQSLKDD-PSQSANLLAEAKSLNVNQAVQLAEKAKEATDKEEVIEIVKELAELAKQSTDSELVNEIVKQLAEVAKEAKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILASELVNEIVKQLEEVAKEATDKELVEHIEKILEELEQQSAFYEILSLNEEQRNAFIQSLK-SANLLAEAKSLNVNQAVKQLAEKAKEKEEVIEIVKELAELAKQSLVNEIVKQLAEVAKEA-TDKELVIYIVKI--------LAELAKQSSELVNEIVKQLAEV----AKEATDKELVIYIVKILAELAKQSTDSENEIVKQLEEVAKEATDKVEHIEKILEE--LKKQS------ | |||||||||||||
7 | 1hciA | 0.10 | 0.08 | 3.04 | 0.91 | CNFpred | ----------------------------------AGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAEQILLQKDYASLTEVRALLRKHE-------AFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHL-EFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLIT-----AHEQFKATLPEADGERQSIMAIQNEVEKVIQSY----NIRISSSNPYSTVTMDELR-------TKWDKVKQLVPIRDQSLQEELARQHA--NERLRRQFAAQANGPWIQNKMEEIARSSIQITGALEDQMNQL---KQYEHNIINYK------------ | |||||||||||||
8 | 6gmhQ | 0.16 | 0.15 | 5.06 | 0.58 | HHsearch-2 | RSFHVQEDY-DQAFQYYYQATSSSFVLPFFGLDKENASQCFEKVLK-AYPNNYETMKILGSLYAAQEKRDIAKGHLKKVTE--QYPDDVEAWIELAQILESAYGTATRILQKVQ-ADVPPEILNNVGALHFRLGN-LGEAKKYFLASLDRDEHISVTTSYNLARLYCEFHEAEKLYKNILREHPNYVDCYLYEASDW----FKEALQINQDHPDALIGNLHLAKQEWGPKKFERILKQPSDTYSMLA---------LGNVWLRHQDRALAIYK-QVLRNDAK---NLYAANGIGAVLAHKGREARDVFAQVREATAD-ISDVWLNLAHIYVEQMYENCLRKFYKHQ--NTEVVLYLARALFKCGKLKQTLLKARHVAPSDKSNLKE | |||||||||||||
9 | 6ezvX | 0.10 | 0.09 | 3.20 | 0.86 | Neff-PPAS | ---------------------QLNPTQQTTQTVITAQCHAILNTQFTPPTVKPDWFDDLSKKLDSAKLVAKQWIDDLGPQVSASIPSSVINFDATFQASIDAIHELYKADPTASGKNTTVQQASQIMTALSSQVSGIEATVKGMNKELSDWGVKMQAAHDDLVNGATNIQKTIIDLQTDIESMNNAIDNNRAAIEKLNKDLVYAQVAVGVGIFMLVAGVALTVATAGTA--------AAVSGGIAAVGAAGVTWGVLQNQIDDDYDSIAQEQKQAEDQQQIIALQGLSNSSAVVSAIETSTSVLSDFETTWTVFGNELDVTKLNNGASMQSIIMEKVMSDAAKNEWDDAVELAKQLASAK-------------IAIETKELAPAV- | |||||||||||||
10 | 6h7wB | 0.12 | 0.06 | 2.31 | 0.48 | HHsearch | DLKLFLESES--FNIDVKHKNKFVEQDDWFHDRR----VYLDALENQLK-ALLKAMDQRKAMAEAAADFSASLHALSTVELSPTLSGPLDALSELQLAIRDVYERQAQQDIIIEEYIRLFSQRQKAFHSWHSAESELMKKKAAQDKLLKTQQDRLNQVNAEVIDAERKVHQ----ARLLFEDMGRLLRSELDRFEREKVEGVETFLESAVEAQKELIEKW------------ETFLMQ---------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |