Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MGSYISIGLTYGIVQRFANLVYDDATNNKIEKELKKLIEYFLDSDGIIKNIKYSEDLEGEHWKEVNSPSPFFPRDCYKSFSRGFYGEVAVHADILKRRGVDLIMRLEKQSEFFGFLLDIKEEDLLETHSKEEIGYMTEELIDTMMSIYKYSKYDYTFCDQEAEFKYSLSSLKKLKEDVYSIVIIPDSDNNSFTVIKSDWNIDGLTGR |
1 | 6jdpA | 0.07 | 0.07 | 2.74 | 0.59 | SPARKS-K | | AFRRYIFELYFDP------ARLLELDDDQHLQRIERFLDALAPLHPVLENWYLCGDSLRDALSHNVTEHRQDLAKALSRDRRT--RAVELVLWNGEEDGLSLDYEASGRAVSSRLQLEDAG------SLLQVFDAPASSFVAIFLAVLEIWPTTWGMLAPH---AYFVHQRT-FPDRRSIIGFCPHPLRGRGTLLLNGREPMDETRR |
2 | 6mfqA1 | 0.12 | 0.08 | 2.88 | 0.67 | FFAS-3D | | -----------------------------LSTAVKELVENSLDAGATNIDLKLKD--YGVDLIEVSDNGCGVEEENFEGLTLEALSDVTISTCHAAKVGTRLMFQKTPYPRPRGTTVSVQRHKEFQRNIKKEYAKMVQVLHAYCII-----------------------------SAGIRVSCTNQLEQGKRQPVVCT--------- |
3 | 6d7yB | 0.13 | 0.08 | 2.83 | 0.44 | HHpred | | -----LFEVIFE-----------GVNTSRLF----FLLKEIESKSDRIFDFNFSEDFFSSNV--NVFSE-----LLIDSFLG-FNGDLYFGVS-EGFSVKDVLLRVLKYEGGVDVGLCFY-NDFNS------AGKV--LEFQKYNGISADFGFENFYGGLEPAS------------------------------------------- |
4 | 5ereA2 | 0.10 | 0.09 | 3.40 | 0.61 | MUSTER | | QFPLLELNAIFKDDRSVAAAAEQLSTTGLRGDRASAILETLFNENQYAYNCVTV-DATGPKQYSSVIGEDISGQEQIIRLHETHQPVLSQAIKVEGFVGIDLEHPVFDQDGFIGSVSVL----TQP-----------DFFGSIISRKVHNFPVEIFVLQRDGTTIYDVN-AEEIGKNAFAIARKVSQAEGEGTYKQLLWTSIGLHGT |
5 | 3ouuA | 0.16 | 0.10 | 3.38 | 0.68 | CNFpred | | -GYPVILKAAAGGGGRGMRVVEN---EKDLEKAYWSAESEAMTAFGTMYMEKYIQ----------------------------NPRHIEVQVIGDS-FGNVIHVGERDCSQKLIEESPAILL----------DEKTRTRLHETAIKAAKAIGYEGAGT---FEFLVDK-------LDFYFIEMNTR--------------------- |
6 | 6d7yB | 0.13 | 0.09 | 3.03 | 0.67 | HHsearch-2 | | --------------KELFEVIFEGVNTSRLF----FLLKEIESKSDRIFDFNFSEDFFSSNV--NVFSE-----LLIDSFLG-FNGDLYFGVS-EGFSVKDVLLRVLKYEGGVDVGLCFY-NDFNS------AGKV--LEFQKYNGISADFGFENFYGGLEPASDQETRFFTNLG-PLL---------------------------- |
7 | 3by9A | 0.08 | 0.08 | 3.04 | 0.80 | Neff-PPAS | | --KYAHIPHLISKDKELVDALLSAQNSAQIDITNRYLEQVNEVIQAADTYLIDRFGNSNWNLDRSFIGRNFAWRPYFYLSIAGQKSQYFALGSTSGQRGYYYAYPVIYAAEILGVIVVKDLSAIEQGQPAWLFHSVADLSPAQLNDIRQSQQYLDSPIPSLGWQGDL-------QAEQSEWRKPEKHWLQDDYIVSSALTIRVLSPK |
8 | 6d7yB | 0.12 | 0.08 | 2.91 | 0.90 | HHsearch | | ---KELFEVIFE-----------GVNTSRLF----FLLKEIESKSDRIFDFNFSEDFFSSNV--NVFSE-----LLIDSFLG-FNGDLYFGVS-EGFSVKDVLLRVLKYEGGVDVGLCFY-NDFNS------AGKV--LEFQKYNGISADFGFENFYGGLEPAS-----DQET----R---FFTNNR-LGPLL-------------- |
9 | 4r04A | 0.13 | 0.13 | 4.38 | 0.55 | SP3 | | LDDKISLIIEINLVAKSYSL-LLSGDKNYLISNLSNTIEKINTLGLDSKNIAYNTDESNNKYISKTSQKSIIHYKKDSKNILEFYNDSTLEFNSKDFIAEDINVFMKDDINTITGKYYVDNNSLVSKNNESVYSSYLDFVKNFMNLFLDNISFWKLFGFENINFVIDKYFTLVGKTNLGYVEFICD-NNKNIDIYFGEWKTSSSKST |
10 | 1utea | 0.06 | 0.05 | 2.37 | 0.73 | PROSPECTOR2 | | PTPILRFVAVGV--------PNAPFHTAREMANAKAIATTVKTLGADFILSTGVHDAKDKRFQETFEDVFSDNVSAQIAYSKIS------KRWNFPSPYYRLRFKIPRSNVSVAIFMDFVSQQPERPRNLALARTQLAWIKKQLLPLLTTHKVTAYLCDHNLQYLQPSKKHLRKVPNGYLRFHFGAENSLGVEITPKEMSVSGPRRA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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