>PF15582 (321 residues) IHQRVAKQVEVLIDSGYLLTTYIEIDEVFSTDSNSLYYIGESDSPGSDGAELPSRVIKYK ERYLCFIELDEPEMSRTELFERGFVSDSNFHENLCLNRGRDWLLALRKYEDKHILVKMLP NYYRLFEYPELWSYFSGDIPQEKTALMGLTSHDIIVPSSYIPDLFELEIDSLKNYVERFS GEIFVRNQTDSVLLLSRNSARSMCYAVINGPDTLKLVLRDSLPVAIAPHDFKSLKYDSEP PHSFLQNLPDKDIWMSMYKLFSDSTFCFLNINNIPQKFRIMHNDAVYSSDLRDSLSKRVR YIYNKGVYDKEERIRRFFKWD |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IHQRVAKQVEVLIDSGYLLTTYIEIDEVFSTDSNSLYYIGESDSPGSDGAELPSRVIKYKERYLCFIELDEPEMSRTELFERGFVSDSNFHENLCLNRGRDWLLALRKYEDKHILVKMLPNYYRLFEYPELWSYFSGDIPQEKTALMGLTSHDIIVPSSYIPDLFELEIDSLKNYVERFSGEIFVRNQTDSVLLLSRNSARSMCYAVINGPDTLKLVLRDSLPVAIAPHDFKSLKYDSEPPHSFLQNLPDKDIWMSMYKLFSDSTFCFLNINNIPQKFRIMHNDAVYSSDLRDSLSKRVRYIYNKGVYDKEERIRRFFKWD | |||||||||||||||||||
1 | 4on1A | 0.07 | 0.06 | 2.52 | 0.61 | SPARKS-K | LRSMDYEDLAGVLSKISNTEHTIMLQEIKAIHGVPVYLFEGQD--KDSSQSYATIRLQRGGDLIDYIVYKD----KERMAEIANYYQNHYIVVCNTGDIKNIRIDITKFKGLPEFMLIKEKDGGSLAVTTSLKFLIDS--GFITVKYTIKDSSH---KGGASDYEVSALESFQNYLREVKGQ-----DKKPYILLRDGTDSGKTFGYASGIGVIH-LNNPR-----GNFEVAAISTTS--------SSHPYTLAHEIGHLLGAE-----HVDNEQD---LMYTWYSPQVTPNHLSADNWVRMLECIQK------------- | |||||||||||||
2 | 3m9gA | 0.11 | 0.06 | 2.15 | 0.51 | FFAS-3D | -----VKEAEQIFNKNNLKLGKISRSYSDKYPENEIIKTTPNTGER----------VERGDSVDVVISKGPEGLPKEEALQKLKSLGLKDVTIEKVYNNQA---------PKGYIANQSVTA-------------NTEIAIHDSNIKLYESLG--IKQVYVEDFEHKSFSKAKKALEEKGFKVESKEEYSDDIVISQSPKGKS---VDEGS-TISFVVSKG---------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 1uasA | 0.12 | 0.08 | 2.88 | 0.28 | HHpred | -EQIIRETADALVNTGLLGYQYVNIDDCWAEYSR-----DSQGNFVPNRQTFPSDYVHAKLKLGIYSDAGSQTCSEEQDVKTFDNCNDAGRSRYKTYGKNIFFSLCEWGKENGNSWRTTGDIADNWGMTSQWAAYAGGWNAKAPLLIG---CDV-------RSMSQQTKNILSNVIKPLRKAVVLWNRQSYTITAHWSNIGSVAVTARDLWAHSSFAAQGQISASVAPHDCKMYVLTPN---------------------------------------------------------------------------------- | |||||||||||||
4 | 5oacA | 0.11 | 0.10 | 3.51 | 0.56 | MUSTER | IKYLSSETEKL---MNQTVSGIDVCFTLIGVDDDSF-GSKNDYISDTPKFLDPSNVLKRGGKDYVLFSEN---LALLAKYSTITQGRDQWEEGVKLAAKEMVHLVYIGNTNWPAHINLKDNDVLEVYVNVVRGAYGAELDAN-ACICDVRTSPSIGVEKFIPFMTSYSIRA-----NQATDLVNLGNDVTRIALLSMTNDVSNIPNAFT---DVTLSSD-RLDKNFNSNQLI----------LEHSKCIEDSV-----RSHANEVDSYLIHEDIEAKVHLPAKIRENTIYLVRSHFQTSLEILQKAVMEEKHQSADIAKVP | |||||||||||||
5 | 5t88A | 0.07 | 0.05 | 2.08 | 1.13 | CNFpred | LSDKLFPEVWEQFSQ-----PTIGMARITK--KGIIASYSEK------------------DRVVIKWFNGDVIVDSKELEREVGDEVLLQGFTTDE-EGEKLAYSFSIGADEGITRIIDLGEVIEEIKPSIWNITFL----KDGYYFTRFYAARMFWKDGERMVFG--------LTSGYFMSIRKSS-DGKFAIVTLTY-NQGEVYIGPI-VPVEAIDVVKLYILTKEGLGKIIAIKNGKIDEVIPE---GEFPLEWAVIVRDKILAGRLVH---ASYKLEVYT------------------------------------- | |||||||||||||
6 | 1vt4I3 | 0.16 | 0.07 | 2.17 | 0.78 | HHsearch-2 | ----------------------------------------------------------------------EYALHRSIVDH--------------------------------------------Y---NIPKTFDSD--------------DLIPPYLDQY--FYSEHPDFRFLEQKI--------RHDSTAWNASGSI----------LNTL-------------------------QQLKFYKPYIC-DNDPKYERLVNAILD-FLPKIEENLIC--------------SKYTDLLRIALMAEDEAIFEAHKQVQRGG | |||||||||||||
7 | 3jc8Ma | 0.06 | 0.06 | 2.43 | 0.78 | Neff-PPAS | -----------------IGSTSIKMILLKEQRKRGEVIYALQSFGMKP---LPPEAIVDG----ALMNSTAIVQAVQDLMSELKVKGKDVAIGVSGHSVIIKKIQMPRMSQDELEESIQWEAEQYIPFDDVNIDTQILDGGGNDATGQMDVLLVAAKKDMINDYTTV---VSEAGLAPVVVDVDAFAVQNMFSVNYDVPERETVVLINAGASVVNINIISNFTEEIQKQLNVSYEEAEALKIGGNGADADAVVPQDVERVLSSVAEQVAGEADSNFSKVYLSGGTAKIPALFKTIEARTGVPVEILNPFRKIEVDNRKFDP | |||||||||||||
8 | 4joxA | 0.16 | 0.06 | 1.86 | 0.41 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AREVHIDVNNKTGHTLQLEDKKLDGGRWRT--------------SPTNVANDQIKTFVAESNG---FMTGTE---GTIY-YSINAEISLYFDNPFAGSNKYDGHSNKS--QYEIITQGGS-----GNQSHQTTSSR---YG--- | |||||||||||||
9 | 3p2nA | 0.10 | 0.09 | 3.37 | 0.76 | SP3 | FTPEQIDHLG-ITDTNHLSAASKRALKWPTDLGNEWFIQFGPLQPLKGDLAYPSAIIKENGKYYVWYSKSTGPTQ--------GFGGDIEKDKVFPWDRCDIWYATSEDGWGPAVTRGEKGAYDDRSVVEIMKWKSPYNVRVKNQVGLAWADSPDGPWTKSEEPILSPAD---------NGVWKGEEQDRFAVIKKGDFDSHKCIIPYKGKFYLYYKGEQMGEAITFGGRQIRHGVAISPYNPISNSGHEICVWP-----YNGGIASLITTDGPEKNTIQWAPDGINFEIKSVIPGVNAHAIGLNRTADVEKEPTEILRWG | |||||||||||||
10 | 3txaA1 | 0.07 | 0.06 | 2.56 | 0.91 | PROSPECTOR2 | TTLKAGEAVEKLIDKTSNKDNRVALVTYASTFDGTEATVSKGVADQNGKALNDSVSWDYHKTTFTATTHNYSYLDANEVNILKSRIPKEAEHINGDRT-----------------LYQFGATFTQKALMKANEILETQSSNARKKLIFHVVPTMSYAINFNPYISTSYQNQFNSFLNK-----------------IPDRSGILQEDFIINGDDYQIVKGDGESFKLFSDR----KVPVTGGTTQAAYRVPQNQLSVMSNEGYAINSGYIYLYWRDYNWVYPFDPKTKKVSATKQIKTHGEPTTLDPGATPLEAEKFMQSIK | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |