Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | DPSASEIETWEAVVSAMQVGSAVFASASAPEGTVQCRINHEMRIIPATGPQPFADAGNWLTALWFAIVCRDQKRMTQLCGLPLDLLRASGAEYDEYIYHWVDSLQTYWLEGPGLVEKLVAAIEMSDPSVARIATREQLNKILYQPINLFRCFLRKDHAAFNEALQEALELHKSYWTANEEREESPAGYLALGPLAITCLAYDAGFPIEVESDYLPKHL |
1 | 5cwfA | 0.11 | 0.08 | 2.81 | 0.80 | SPARKS-K | | VELAKKNNDDEVAREIERAAKEIVEALRENNSD---------------------EMAKVMLALAKAVLLADDEVAREIARAAVEALRENNSEMAKVMLALAKAVLLAAKNDDEVAREIARAAAEIVEALRENNSDEMAKKMLELAKRVLDAAKNNDDETAREIARQAAEEVEAD-------------------------------------------- |
2 | 3ihuA2 | 0.17 | 0.11 | 3.47 | 0.84 | FFAS-3D | | ---LSLQETLDVLDVAERTGLL---------------------------------------ARAATRGSGNQPQVQALRASVQALVAAEKAQDGETFSNARRHFYRTLLEGDN--RELRRLFPTIHPIVHAQHRLASLRQRLDDYRRIATAVLAGEPDAAEAAGAAHVKNVRGAILDRQ--------------------------------------- |
3 | 2fy3A | 0.09 | 0.07 | 2.82 | 0.34 | HHpred | | ---------------DTHRALLLHGANRWYDKSLQFVVGGTGVVC----EHSPFDGIVLVQCTLKHMTQPE--L----VRSPMVPLRRLRWKCSPIQGHLASSAEKLIKKQKSPDAFIQVALQLAHRRYESEGRVDNIRSATPEALAFVRAVTDHKASEKLLLLKDAIRAQTAYTVM----AITGMA-IDNHLLALRELARAMCAALPFMDET----- |
4 | 5cwpA | 0.13 | 0.13 | 4.44 | 0.74 | MUSTER | | -MSSDEEEARELIERAKEAAERAQEAAERTGDPRVRELARELKRLAAEEVKRDPSSSDVNEALKLIVEA--IEAAVRALEAAERT-PEVRELARELVRLAVEAAEEVQRSSSDVNEALKLIVEAIEERTGDPEVRELARELVRLAVEAAEEVQRNSSEEVNEALKKIVKAIQEAVESLREAEESGDPEKREKARERVREAVERAEEVQRDPS---GWL |
5 | 3vxdA | 0.13 | 0.11 | 3.84 | 0.77 | CNFpred | | --LLTKIEVEEAIEKALKQLYINIDYFG--EEYPTPATFNNIYKVMDN---TEWTNGFWTGCLWLAYEY-LKNIAHKNVLSFLNRINNRILDHHNLGFLYTPSCTAEYRIN---DVKALEATIKAADKLMERY--LIIDCLLNIQLLFFAYEQTGDEKYRQVAVNHFYASANNVVRDDSSAF-SWARGQAWGIYGIPLSYRKM--------------- |
6 | 1vt4I | 0.14 | 0.13 | 4.38 | 0.67 | HHsearch-2 | | DPNWTSRSNIKLRIHSIQAELRRLLK-SKPYENCLVLLNVQNKAWNAFLTTRFKQVTDFLSLLLKYLDCRPQDLPREVLTTNPRRLS-----------I---IAESIRDGLCDKLTTIIESSNVLEPAEYRKMFDRLSPSAHIPTILL--SLIWFDVIKSDV-MVVVNKL--HKYSLVEKQPKESTISIPSIYLELHRSIVDYNIPKTFDSDLIPPYL |
7 | 5cwmA | 0.12 | 0.12 | 4.20 | 0.76 | Neff-PPAS | | DPEDELKRVEKLVKEAEELLRQAKEKGSEEDLEKALRTAEEAAREAKKVLEQAGDPEVALRAVELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGELVVRVAELLLRIAKESGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESG---SEEAKERAERVREEARELQERVKELRER- |
8 | 1vt4I3 | 0.13 | 0.10 | 3.50 | 0.82 | HHsearch | | ---------EYALHR---SIVDHYNI------PKTFDSDD-------LIPPYDQYFYSHIKNIRMTMVFLDFRFLEQKIRHDSTAWNASGSILNT--LQQLKFYKPYICDNDPYERLVNAILDFLP-KIE-------ENLICSKYTDLLRALMAEDEAIFEEAHKQ-------VQRGGGGGGGGGGGGGGGGGGGG-----GGGGGGGGGGGGGGGG- |
9 | 5h7cA3 | 0.15 | 0.11 | 3.89 | 0.69 | SP3 | | ----DSELVNEIVKQLAEVAKEA------TDKELVIYIVKILAELAKQSTDSELVNEIVKQLAEVAKEATDKELVIYIVKILAELAKQSTDS--ELVNEIVKQLEEVAKEATD--KELVEHIEKILEELEQQSAFYEILSLPNEQRNAFIQSLKDDPSQSANLLAEAKSLNVNQAVKQLAEKAKEA-------------------------------- |
10 | 5cwmA | 0.13 | 0.11 | 3.84 | 0.76 | PROSPECTOR2 | | DPEDELKRVEKLVKEAEELLRQAKE-------------------------KGSEEDLEKALRTAEEAAREAKKVLEQAEEGDPEVALR----AVELVVRVAELLLRIAKESGSVAEEAARLAKRVLELAEKQGDPEVALRAVELVVRVAELLLSGSEEALERALRVAEEAARLAKRVLELAEKQGDPEVARRAVELVKRVAELLERIARESGSLQERV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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