>PF15551 (358 residues) QQMRDRKGRKAELKDPNGREAETITFISGTAEAPPNQSFCCSSLSQAWNTYKAVFCCIVT CGGCFQDCSVCIPYPGPAETSTEDGKNGDYNGRLPNSPTNTSPAEKNGNQIKKSSMGSSF SYPDVKLKGIPVYPNRNTNHHPESDSCCKELLEKPFRNSIEKPPLPSSHRSSEEYYSFHE SDVDISELNGSMSSRQIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSI TQDYNLDEQDAECRLVRGIIRISTRKSRVRPHIPLPSQSHEEKSGRGNAPDSGNETMLES MVISQDELAVQISEETPADVLARNMRRHSSAGSPTSRDSSFQDTETDSSGAPLLQVYC |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QQMRDRKGRKAELKDPNGREAETITFISGTAEAPPNQSFCCSSLSQAWNTYKAVFCCIVTCGGCFQDCSVCIPYPGPAETSTEDGKNGDYNGRLPNSPTNTSPAEKNGNQIKKSSMGSSFSYPDVKLKGIPVYPNRNTNHHPESDSCCKELLEKPFRNSIEKPPLPSSHRSSEEYYSFHESDVDISELNGSMSSRQIDVLIFKKLTELFSVHQIDELAKCTSDTVFLEKTNKISDLINSITQDYNLDEQDAECRLVRGIIRISTRKSRVRPHIPLPSQSHEEKSGRGNAPDSGNETMLESMVISQDELAVQISEETPADVLARNMRRHSSAGSPTSRDSSFQDTETDSSGAPLLQVYC | |||||||||||||||||||
1 | 5az4A | 0.08 | 0.08 | 3.14 | 1.10 | MUSTER | GVNAFDPNLQQNQTAAFWGTANQKVNLDITLNGVRIQNADIQSIDDAIAYINTFTAPRDGTGVKAVKNKDGSGIDFVNDNADGTTDNMKANTNTAGELWNAVWNNNNQTFTFNNNGNGQAGTPTINKNGSSLWTATNITFTPQPPQAATNVQLTGGLNAQIITASSNPVDIGPMYNPDGGPAFQPGANATTRPTEPGSAAYWDAVNGGLLN---------TNVRTFTEDLRELLQRDARYGVDYDGSGTFAAADINQNIKVVVTADGHSNANEQSTVPPNAINGVGNATTTDPKNMSFNITAYSNKQGT-----VSTNDAFTAIFKAFDGPLVIGNQIKESEQLKLSAFSA--LEIYD | |||||||||||||
2 | 3cnfT | 0.08 | 0.07 | 2.88 | 1.67 | Neff-PPAS | KPNQIRTITSHTLRLLGPFQYFNFSETDRGHPKYPSKAIPADELIDNLHSWMRSVHLLHVRS-----EDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPAILNYSNPQDAFNSVFVALGIDYIDIP------ITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHSSWHWDVLHTFHYRSESDMID---HFAAKILEDWRQK-------EKLDKGALVEADRVVQRLIPLSSSTYVQRLAAISRLSTALLQLSDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNI-------LLYPYTYIFTTAYTSMNYISNTGQGRIKHSLAVTGTTEHTIAD | |||||||||||||
3 | 2nbiA1 | 0.14 | 0.13 | 4.38 | 1.33 | PROSPECTOR2 | QPSDLNPSSQPSECADVLEELPYSDASRPPSCLSFGRPDCDVLPTPQNINCPR--CCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEEPLDTCFLPTSDPARPPDCTAVGRPVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCA------------------EVIEQCPIDECFLPYGDSSRPLD---CTDPAVNRPDCD--------VLPTPQNINCPAECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPSPTMLPSPSPSAVTVPLTPAPSSAPTR | |||||||||||||
4 | 6e5oY | 0.12 | 0.11 | 4.09 | 0.88 | SPARKS-K | YFGRCNVAEHEKLTYSLGKGQRALDFIHVTKESTPVKPLAQRYASGPVGKALSDACMGTIASFLSKYQDIIIEHQKVVKGNQKRLESLRENLEYPSVTLPPQPHTKEGVDALNLWQKLDDAKPLLRLKGFPSFPVVRRENEVDVKKLIDAKRDNYLPNENDHKKRENPKKPAK--RQFGDLLLYLEKKYWGKVFDEAWERIDKKIAGLTSHIEREEKAVLMDEKEFYACEIQLQKWYGDLRGNPFAVEAESGFSIGRNLLAWKYLENGKRKKGRIDGTDIKKSGKWQGLLYGGGKAKVIDLTFDPDDEQLIILPLAFGTRQGREFIWNDLLSLETGKTIYNKKIGRDEPALFVALTFE | |||||||||||||
5 | 5mqfT | 0.09 | 0.08 | 3.09 | 0.53 | FFAS-3D | QRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPIFTHVYAALVAIINSKFPQIGEKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDINLVSFRRTIYLAIQSSLDFEECAHKLLCNMILDCFFGLLAGRF--CMLKKEYMESEGIFKEQYDTI-HRLETNKLRNVAKMFTDSLPWSVLECIKLSEETTTSSSRIFPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINFFTSILTDELREH------------------------------ | |||||||||||||
6 | 4h9nC | 0.22 | 0.08 | 2.56 | 0.31 | HHpred | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAEIRRLQEKELDLSELDDPDSAYQEARL-KRKLIRLFG--RLCELKDCSSLTGLINKPGDVLRAVEKAAARHSLGLPRQQLQLAQDAF-R--------------DVGIRLQERRHLLI----YN-FGCHLTDGVDPAL------SDPVLARRLRENRSLAM------------------------- | |||||||||||||
7 | 2nbiA | 0.13 | 0.13 | 4.43 | 1.07 | MUSTER | LNPSSQPSECADVLEECPIDECFLPYSASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPASQPSQCAEVIEQCPIDECFLPYGDSSRPLCTDPAVNRPDCDVL-----PTPQNINCPACCAECRPDNPMF---TPSPDGSPPICSPTPSPEPSSQPSDCGEVIEECPIDACFLPKSDSA---RPPDCTAVGRPDCNVLPFPNNPFECSPDNPMFTPSPDGSP---PNC | |||||||||||||
8 | 5torA | 0.05 | 0.01 | 0.69 | 0.41 | CNFpred | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PAQGARIVARTLSDPELFHEWTG-NVKTMADRILSMRSELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYL-----------------------NQKHIYLLP-SGRINMCGLTNLDYVATSIHEAVTKIQ------------------------- | |||||||||||||
9 | 2pffB | 0.15 | 0.14 | 4.61 | 0.77 | HHsearch-2 | QEQFNKILPEPTEGFAADDEPTTLGYVSSLVEPSKVGQFD-----QVLNLCLT---EFENCYLEGNDHALAAKLLQENDTTLVKAKRPFDKKSNS--ALFRAVGEGN-------------AQLVAIFGGQGNDDYFEE--LRDLYQTYHVLVSAETLSELIRTTLDAEKVFTLNILEWLENP-SNTPDKDYLSIPISCPLITAKLLELRSLVTAVAIAETDSWSFFVSVRKAITVLFFIGVRCYELENNEGVPSPMLSISNLEQVQDNKHLPAGKQVEISLVNGAKN-LVVSGNLTLRKALKFSNRFLPPFHSHLPASDLINKDLVKNNVSFN--AKDIQIPVYDTDGSDLRVLSVDC | |||||||||||||
10 | 3iymA | 0.08 | 0.08 | 3.16 | 1.48 | Neff-PPAS | EPTRDQEFALPVHKAFPLFGSVSDKYRRNPREFTDGVFGTHLAVSSLLRLAQQLVHAHVNMGLPLGDFAPLASSDVRIPSALASVVNQFGEFSSPSIGTRFLLRDFEHAVSRVVFLADQLWTNGNSHHIFARSWLPMSNNDGNFKTIVASRLLEFISAGSILPTVLEDAVLSGEVPEAWEQVKDLLGDAPGVGQVDRRDRFDFLFKSYADVGQFTTAFTTQAASDVLTELGLPWNSPSAGHLNWQYSTKQRFTFLADTWAKLSAAYSQFFELSSGLATR----------QSATGSHAQMVDLTSVEGVTVLKAALALSAPEFSLAACFPPSCIFVGGLTRRVVVTTSLSVSQRATEFC | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |