Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | LAYDMKQPKSVRGWVLNEIKRQKDFAAMGIKKKLRLPPGMDLAHWRGFESAKGYDYTYTDLNTRSLHKTQHKID |
1 | 5xyiM | 0.12 | 0.11 | 3.78 | 1.09 | SPARKS-K | | LADDCENK--------DYKNLVAGLCKKHNVKLQAVEKKELLGRALGLT--HQMNCGACAIIRYELDEFRKAFD |
2 | 1xi4K | 0.12 | 0.11 | 3.84 | 1.02 | Neff-PPAS | | VDRLQSEPESIRKW------REEQTERLEALDANSRKQEAEWKEKAIKELDEWYARQDEQLQKTKANNRVADEA |
3 | 5njtF | 0.04 | 0.04 | 2.07 | 1.09 | SPARKS-K | | YIIRPNIDE--ESKKAVIERFNNVLTSNAEITGTKDWGKRRLAYEINDFRDGFYQIVNVQSDAAAVQEFDRLAK |
4 | 3t4nB | 0.17 | 0.15 | 4.89 | 0.39 | FFAS-3D | | --TPPQLPPQLENVILNKYYATQDQFNENNSGALPIPNHVVLNHLVTSSIKHNT------LCVASIVRYKQKY- |
5 | 6fhvA3 | 0.21 | 0.15 | 4.73 | 0.22 | HHpred | | ----------LTPFIHKEGERSLQGDNLGGKKTPGTAAGLFIASPNTENP----NYYYTWTRDSALT------- |
6 | 2m4gA | 0.11 | 0.11 | 3.88 | 0.92 | MUSTER | | ---GRPGVFRTRGLTDEEYDEFKKRRESRGGKYSIDDYLADREREEELLERDEEEAIFGDGFGLKATRRSRKAE |
7 | 2qc7A | 0.12 | 0.03 | 0.96 | 0.45 | CNFpred | | ------------DFPASEMTRIARLIEKN--------------------------------------------- |
8 | 1wwqA | 0.20 | 0.08 | 2.59 | 0.36 | HHsearch-2 | | LVYRADTQTYQKDWIKEKIYVLLRRAQAGK-------------------------------------------- |
9 | 3j65r1 | 0.02 | 0.01 | 1.09 | 1.01 | Neff-PPAS | | -SKAQTLNSNPEILLRKRRNADRTRIERQELAKKKREEQIKKKRSNKNKFVRAES------------------- |
10 | 2giaG1 | 0.19 | 0.14 | 4.36 | 0.43 | HHsearch | | ------------KWRRPSLAQ-Q----RARRA--QLPPAFDVVHWNDEDISRGHLLRDTFVVL-DYHRQARML- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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