Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MRRRLLAQRASGKESLLDFLLDADGQWQKGSFIARSGRPMRGRYALSDPDRQIVQAGHMLSDWYVKAMSRRDHLMLEDADLNWMSGFTEASGSVTSKSAVLIEGYPVDIPTARLWEAHGKLPAGTVSAAPVVEPP |
1 | 4q9dA2 | 0.12 | 0.11 | 3.96 | 0.68 | SPARKS-K | | RLAQFAERINAAKH-PMPEVDRAGAEKLGAPVHASALPDRMSF----PEDHPLYAGPLMTIAGVEQAVSAYDLVVVVGAEVFRYYPYVPGEYLPEGTDLLQITSLVGDGIALSRLTELIDTPDDRVPPKPLVRQ- |
2 | 3tlxA1 | 0.15 | 0.11 | 3.76 | 0.33 | FFAS-3D | | LNELKRRYACLSKPDGRYIFLGAPG----------SGKGTQSLNLKKS-----HCYCHLSTGDLLREAAEKKTELGLKIKNIINEGKLVDDQMVLSKKGFILDGYPRNVKQAEDLNK------------------ |
3 | 4cyiA | 0.19 | 0.10 | 3.10 | 0.38 | HHpred | | ------------ENGRIARSL-KLL------TI--LERGDRRDYVFHDADKPNLSIGHLTC-SKLEA-GVDENILLTSRDNETVFVLSELR-------------------------------------------- |
4 | 2qybA | 0.18 | 0.16 | 5.32 | 0.64 | MUSTER | | IIDDLLNLLLKEFKLDL-RLVDEKGVLRVRSYSGKGIAGIAGKDWEPEIETYIGEAFLSNRLQFVNDTQYTKPLTRELQKEGISRKGEPPFGSVFSRT----IVGLFNEPFLNLLESLAGQLAQAVKIV------ |
5 | 3tkjA | 0.14 | 0.08 | 2.80 | 0.63 | CNFpred | | AATVGYGILREG-GSAVDAVEG------------------AVVALEDD---PEFNAGCGSVLNTN---EVEMDASIMDGK------------DLSAGAVSAVQCIANPIKLARLVMEK----------------- |
6 | 4cyiA | 0.13 | 0.09 | 3.09 | 0.48 | HHsearch-2 | | LKSAVNWLLDTSSNGRIARSL-KLL------TI--LERGDRRDYVFHDAGKPNLSIGHLTC-SKLEA-GVDENILLTSRDNETVFVLSELR-QY--------D------RAFNELVKAS---------------- |
7 | 6n39A2 | 0.11 | 0.10 | 3.74 | 0.78 | Neff-PPAS | | -GDVIAREVVRPGTEGLAALVEAFGRDISLDRPALAAKAFADDAARQTLNGIVHPLVGARRAEIIASVPADSVVVEDIPLLVESGMAPLFPLVVIVYA-------DVEVRLRRLVEQRGMAEADARARIAAQASD |
8 | 3ucsA1 | 0.09 | 0.03 | 1.13 | 0.38 | HHsearch | | ---------------------------------------------------------------------------------------ATVTVTFTITELCLR--TGVSEEELTEIVGLGMIEPHQQADTWLFD-- |
9 | 1guzA1 | 0.14 | 0.13 | 4.33 | 0.59 | SP3 | | VATTAFRLAEKQLARELV-LLDVVEGIPQGKALSGPVGLFDTKVTGSNDYADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSNPLDIMTHVAWVRSG-LPKERVI-------- |
10 | 3ucpA5 | 0.09 | 0.09 | 3.40 | 0.49 | PROSPECTOR2 | | ISEAKCANCHGEKADFSASHALTHAADKPDAVPNTAVALADGSGAPAHSKKPFERGFDFKVMIHQIHADTRSVRRLTTDAATFPENPQLSLATLGNKPAFLASTGEYDSAVIGHFETNGGVYNAAAGTYTPGSET |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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