Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LKGYERAHLWGHGFGDEAKLGLMYAPKALNQEVQNFGFEKFIRELQVLSQQEGRKVFCRCKAFSHPPKGKSLNAAKGELLISEVFYEVVYEAKDGRKIVGKFAASI |
1 | 4k02A | 0.05 | 0.05 | 2.18 | 0.75 | SPARKS-K | | GFEFDELSPTRITGRLPVSPVCCQPFKVLHGGVSALIAESLASMGAHMASGFKLGDLVFAEATPVSTGKTI----------QVWEVKLWKTTQANKILISSSRVTL |
2 | 2c35B | 0.09 | 0.07 | 2.56 | 0.54 | FFAS-3D | | ---------------------ILLHPRYFGPNLLNT-VKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGV-IQPGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQV- |
3 | 2xgrA | 0.14 | 0.12 | 4.19 | 0.32 | HHpred | | IWVMNRGHLVGYQFCGLEPRNLVAMTAWLNTGGML-YYENRLDSWLALHP--DFWLDYKVTPIYSG----------NEVVPRQIELQYVGIDSSGELTIDETTVIL |
4 | 2ctrA | 0.14 | 0.10 | 3.53 | 1.25 | MUSTER | | ILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQSGPSSG----------------------------- |
5 | 5fgwA | 0.12 | 0.10 | 3.67 | 0.68 | CNFpred | | ---FDRSGLIADSLGRPFRNNLITGTRTQNVGNNKGGMQYIENKVLDHIKRNKVHVYYKATPVYQ----------GSELLPRAVLVSALSSD-GFIDETVRVFNNV |
6 | 2xgrA | 0.14 | 0.12 | 4.19 | 0.63 | HHsearch-2 | | IWVMNRGHLVGYQFCGLEPRNLVAMTAWLNTGGML-YYENRLDSWLALHP--DFWLDYKVTPIYSG----------NEVVPRQIELQYVGIDSSGELLTIRTTVIL |
7 | 3b8lA | 0.09 | 0.08 | 3.19 | 0.90 | Neff-PPAS | | --FTEDAVFDLSGIGLTPQVGHAGIREFFTNVFANSHHAHYLTNFAVTGYEGDTASRAYVIGGVGK---------DGRAVTVNGRYFFEVRRTEKGWKATRYTDFL |
8 | 2xgrA | 0.14 | 0.12 | 4.18 | 0.46 | HHsearch | | IWVMNRGHLVGYQFCGLEPRNLVAMTAWLNTGGML-YYENRLDSWLALHP--DFWLDYKVTPIYSG----------NEVVPRQIELQYVGIDSSGELTIDETTVI- |
9 | 5w1jA3 | 0.15 | 0.14 | 4.75 | 0.74 | SP3 | | LDH-NPGKTVGASYSLECAGFLSSIGCDVSIFLRGFD-QQMAGLISDYIAKYGVKFVRPCVPTSVRCLEEYDPESGKLA-----IYEVEGKHEDGTPFKDTFNTVL |
10 | 4xzzA2 | 0.09 | 0.08 | 2.88 | 0.49 | PROSPECTOR2 | | --------------TKEELSMILSSLFQWKEAWARGDFERYFKEYKKRVFAKNEKKNIAFSSINVIPYPNS---QNKRLFYVVFDQDYKAYQHNKLSYSSNSQKEL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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