Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NWKFNPVKDVDMRGGASYRSALDEAFRRTGVPKEQFTVTKWGKTIDGKSIPVEYTGPGGANVNMDIPSLDNVKSNGGLGEGPHQPHIGYQTPGKGSSRTRGHIFVDNVPATR |
1 | 5t86A | 0.12 | 0.10 | 3.46 | 0.81 | SPARKS-K | | ---------QILKPEKNWETARNKALDLVGLGADSKPVIGRLEVSAGNGKVIGRQSSDGVGWRVDYDPEKG-------------THINIWDYSQGKGAVKQVIPFEGNEKSF |
2 | 3hwuA | 0.13 | 0.12 | 4.30 | 0.48 | FFAS-3D | | ELKGKYKTPLVLRHGDNVLQNLEQLARDEHIPSASFVGIG------FSEATFGFYDFGRKQFDPK-TYRNVEANTGSIAWKEGKPHAHGTVTDGTFQGAGGHLLGLTVGTG- |
3 | 5t86A | 0.15 | 0.12 | 3.89 | 0.27 | HHpred | | ----------ILKPEKNWETARNKALDLVGNGADSKVIGRLEVS-AGNGKVIGRQSSDGKRVDYDPE------------K---GTHINIWDQGKGPKAVKQVIPFEGNEKS- |
4 | 5xxzA | 0.13 | 0.13 | 4.62 | 0.75 | MUSTER | | VHRNQPQSQLTKNQDFSPNEDGNKDFVAFKGLENNLTVNVYAKDDHQKQTPIWSSQAGAGASAIESTAWYGITARGSKVPGDYQYVVTYRDEHGKEHQKQYTISVNDKKPIT |
5 | 4mjgA | 0.11 | 0.05 | 1.95 | 0.59 | CNFpred | | -------------------ERLEKLVTEN--KPDWAVAVQVDKQIDRATRGIQLIDNYGGLVEFKFS---------------DSIAVRSRSA-------------------- |
6 | 5yxiA | 0.18 | 0.11 | 3.49 | 0.36 | HHsearch-2 | | ELPNKQRTVINVRPGLTLKEALKKALKVRGIDPNKVQVYLLLSGDDGAEQPLSLNHPIGKKLKVVPL--------------------------------------------- |
7 | 2wgoA | 0.14 | 0.11 | 3.68 | 0.84 | Neff-PPAS | | KDKLKLPVIDNLFGKELLDKFQDDIKDKYGVDTKDLKILKTSEDK--RFYYVSVDAGDGEKCKFKIRK------------DVDVPKMVGRKCRKDDDDDDGY---------- |
8 | 5yxiA | 0.18 | 0.11 | 3.49 | 0.42 | HHsearch | | VELPKQRTVINVRPGLTLKEALKKALKVRGIDPNKVQVYLLLSGDDGAEQPLSLNHPIGKKLKVVPL--------------------------------------------- |
9 | 2ylmA5 | 0.13 | 0.10 | 3.41 | 0.65 | SP3 | | DEEKVKYTVFKVLKNSSLAEFVQSLSQTMGFPQDQIRLWPMQARSNGTKRPAMLDNEADGNKTMIELSDNENPDPELAASGATLP--------------------------- |
10 | 5njlA3 | 0.05 | 0.04 | 2.15 | 0.51 | PROSPECTOR2 | | ATEKYE----NSADLSAEANSITEKAKTETNGIYKVADVKASYDSAKDKLVITLRDKTDTVTSKTIEIGIGDEKIDLTANPVDSTGTNLDPSTEGFRVNKIVKL--GVAGAK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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