Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NPLSIIPKDAVQEPWKPIPGGVEHGIKWKWTDDVTGKTVRMRVHGPDLGPHAGPNASSGPIYRIQIGHQFQDEAGKLYHAQIGNVNSPNYNEAAINDTHIPWP |
1 | 2z6bD1 | 0.08 | 0.08 | 3.03 | 0.72 | SPARKS-K | | NLSVKLFDSWSNNRFVE---LAATITTLTMRDSLYGNEGMLQFYDSKNIH---TKMDGNEIIQISVANANDINNVKTRIYGCKHFSVSV-DSKGDNIIAIELG |
2 | 3kzsA2 | 0.13 | 0.10 | 3.37 | 0.50 | FFAS-3D | | --LVYNYTGRPEVDFSKISGAK---KNAWWYTTKDGKLEYIGEFDNGFQHDSGYSSGNDHVLIVV------DSSKDYVKKDCYQID-----------TH---- |
3 | 2iufA | 0.20 | 0.17 | 5.60 | 0.29 | HHpred | | DFFSQQPSVLHTLLWA-AGHGIPRSFTFRLVTD-DGKTKLVKFHKGLQGKADQAGRFPEWELGVQIMQDLLDPTKIV-PEEQLNRN-PNYFAETE-------- |
4 | 5njlA3 | 0.14 | 0.13 | 4.34 | 0.77 | MUSTER | | NSADLSEANSITEKAKTETNGIYKVADVKASYDSAKDKLVITLR--DKTDTVTSK-----TIEIGIGDEKIDLTANPVDSTGTNLDPSTFRVNKIVKLGVAGA |
5 | 2zwsA | 0.10 | 0.04 | 1.44 | 0.65 | CNFpred | | ------------------------DTQYRWERVGSASKATISWSIPPGT--------EPGHYYIRHYGNAKN------------------------------- |
6 | 2pffB | 0.18 | 0.17 | 5.69 | 0.68 | HHsearch-2 | | YPNTSLPPSLENNEGVPSPMLSISNQEVNKTNSPAGKQVEISLVNGNLVAKAPSGLDQIPFSKLKFSNRFLPVASPFHSHLLVVKNNVSFN---AKDIQIPVY |
7 | 2ocwA3 | 0.07 | 0.07 | 2.83 | 0.86 | Neff-PPAS | | -PELVYEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPLLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEE |
8 | 2eabA2 | 0.13 | 0.11 | 3.71 | 0.36 | HHsearch | | NILPALPDAWAGGSVSGL--VARGNFTTTWKN---GKATEVRLTSNKG-----------KQAAVKITAYEVKNGDTAVNAKVVGASLLVFDTT-AGTTTITK- |
9 | 4a0tA2 | 0.06 | 0.05 | 2.18 | 0.60 | SP3 | | -------VAKSKAWTQVWSGSAGGGVSVTVSQDLRFRNIWIKCANN-SWNFFRTGPDGIYFIASDGGWLRFQIHSNGLGFKNIADSRSVPNAIMVENE----- |
10 | 1ktke1 | 0.04 | 0.04 | 2.05 | 0.56 | PROSPECTOR2 | | GAVVSQHPSRVIAKSGTSLDFQATTMFWYRQFPKQSLMLMATSAEGSKATYEQGVEKDKFLINHASLTLSTEDSSFYICSALAGSGSSTDTQYFGPGTRLTVL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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