Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | PGVNARFTDLEWAKIRVEIIGGGTDVPIWDSEEYRLSDAFIRRMREMLDAVAGGSVDTWENYTTTTEVSNATFGGLRVGTHGQLTGRPTGDVDLEPVSGEGAGMMSRPARAGRQSHHIPQYLLIQYLQNLRSASTKIAHEGGGRPLFPPGFSVTGNTATGFSGAGRTLDFARLDPGSTTDRGRGLPAISLAAKTHQKGQLHINAA |
1 | 4btgA1 | 0.14 | 0.10 | 3.52 | 0.75 | SPARKS-K | | VGKGNIDPVMYARLFFQYAQAGGAL-------SV---DELVNQFTEYHQSTACNPTGSSNRAIKADAVGKVPPTAIL-------------------------EQLRTLAPSEHELHHITTDFVCHVLSPL------------GFILPDANFYALVDCVRASDLRRMLTALSSVDSKTFKAKGALAPALISATTAFERSRGN---- |
2 | 2xzbB | 0.12 | 0.09 | 3.12 | 0.45 | FFAS-3D | | -------TLSRWVWISLYYV-----------AFYVVMSGIFALCIYVLMRTIDPYTPDYQDCTSEKYFFQESFLAPNHTKFSCKFGKPCFIIKMNRIVKFLPGNSDGPPLYS-----------LHYF-------PYYGKKAQPHYSNPKLLNVPRNRDVVIVCKILA---EHVSFDNPHDPYEGKVEFKLKIQ------------ |
3 | 6az1X | 0.12 | 0.07 | 2.43 | 0.44 | HHpred | | ----------------------RKGA-----SLKDVAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGREQNPDVLAIYLRPGVG-----YGGLSKRFGNNYG--SRPEHTVTSSTGPLHWACKSL-TKLGLVEPG---AQSGQR---------------LTRKGHFADSLAFQ------------------------------- |
4 | 5yvqA1 | 0.12 | 0.11 | 3.80 | 0.52 | MUSTER | | ---KAVKIAMDNANARLAKDRNGADIP--NKPLFIQNLGLQETVNRARNAVQGDTLSGGLTFENDSILAWIRNTDAKIGFKNDADSDTDSYMWFETGDNGNEYFKWRSKQSTTTK----------DLMNLKWDALSVLVNAIVNGEVISKSAAYGNYGFFIRNDGSNTYFMLTNSGDNMTYNGLRPLWIN-----ATGAVSMGRG |
5 | 5hgvA | 0.15 | 0.03 | 0.99 | 0.45 | CNFpred | | ---------EYLKKVRGKVWKQRISSPLFNTK--QYTMELERLYLQMWEHYA--------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 2pffB | 0.17 | 0.15 | 4.80 | 0.40 | HHsearch-2 | | DSWESFFVSVRKAILEDSLENEGVPSPMLSISNLTQEQVYVNKTNSHLPAGKQSLVPPQSLYGNLAKAPGLD--Q----------SR-IPFSE-RKLKFSNR--FLP-VASPFHSHLLVPDLINKDLVKNN-VSFNAKDI--QIPVYDT-FDGSD--LRVLSGSIRFKATHILDFGP-------GGASGLGVLTHRNGTLDINPD |
7 | 4b03D | 0.10 | 0.08 | 2.91 | 0.78 | Neff-PPAS | | ----HLTTRGGEPHMIVSKQERGKSLLFKTSAGVNMCTLIAMDLGELCEDTMTYKCPRITE-TEPDDVDCWCNATETWVTYGTCSQTGEHRRDKRSVALAPHVGLGLETRTETWMSS----------EGAWKQIQKVETWALGHPGFTVIALFLAHAIGTSITQKGIIFILLMLVTPSMA------------------------- |
8 | 6az1X | 0.12 | 0.08 | 2.90 | 0.72 | HHsearch | | ----NK----------IHRIGKRKGA-----SLKDVAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGREQNPDVLAIYLRPGVG-----YGGLSKRFGNNYG--SRPEHTVTSSTGPLHWACKSL-TKLGLVEPG---AQSGQR---------------LTRKGHFADSLAFQVQIR-KFG----------------------- |
9 | 4c2tA | 0.06 | 0.06 | 2.54 | 0.59 | SP3 | | EGRAWSRTNAQSRVIEESLRRVQIPARIVGGVGFYDRREIRDILAYARLALNPADDVALRRIIGRPRRGIGDTALQKLMEWARTHHTSVLTACANAAEQNILDRGAHKATEFAG--------LMEAMSEAADNYEPFLRFVMETSGYLDLLRQEGQEGQVLENLEELVSAAEEWSQDEANVGGSIAD-FLDDAALLSSDMRTKAE |
10 | 4k0mC | 0.12 | 0.11 | 3.79 | 0.84 | PROSPECTOR2 | | KARTAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLG---------KQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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