Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PQQFLRAPRTDLPYGPFEPAALTSLDNNLDKGFPLLAPPVPTVPHPFAMHDVAEDDWQRFLHDVKIASSLSTMDKIKAGVAPMAIGVAPLTGFLVSKGIEKRMRTKKSNAIGELIEHWNAHFFHPR |
1 | 5cwiA2 | 0.14 | 0.12 | 4.06 | 0.83 | SPARKS-K | | --------------------ADIAKLCIKAASEAAEAASKAAELAQRHPDSQAARDAIKLASQAAEAVKLACELAQEHPIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVK |
2 | 5zyqA1 | 0.09 | 0.07 | 2.76 | 0.64 | FFAS-3D | | -----------------GSIEIPLRDTDEVIELDFDLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEEFVKLLEDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKDLITQATLLY---- |
3 | 3n9tA | 0.17 | 0.07 | 2.36 | 0.30 | HHpred | | -----------------------------------------RHLHDFSEVELTEQEWFEGIRFLTATGQKCDGQEFIL--LSDTLG----VSMLVD-AINHR------------------------ |
4 | 5glhA | 0.10 | 0.10 | 3.57 | 0.75 | MUSTER | | EGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQRWDEAAVNLAKSR |
5 | 6enoA | 0.03 | 0.02 | 0.98 | 0.53 | CNFpred | | --------------------------------------------------KLNAENLRAGIEKINKKRKALKRLSDLRKHNPAPIHGLDVLLINQLAFF------DDPERFATKVNELCDELEERV |
6 | 1co0A1 | 0.14 | 0.05 | 1.62 | 0.35 | HHsearch-2 | | ---------------------------------QSPYSAA------MAE--QRHQEWLRFVDLLKNAYQNDLHLPLLNLMLTP------------------------------------------- |
7 | 2uxuA2 | 0.07 | 0.06 | 2.68 | 0.69 | Neff-PPAS | | ----EVDPLGCMRKLLLQVFNELVLDARTRRINEILHHKCEFTDDMCEIRQQRQSAVLDCHKGITLALANAVRRGQLPGAERAAVAMFAYVDGLIRRWLLLPDSVDLLGDVEKWVDTGLDMLRLSP |
8 | 6gtrC | 0.15 | 0.05 | 1.60 | 0.32 | HHsearch | | --------------------------------------EQ------HRRVILNEESWTRVMDALSNPPSPGEKLKRAA---------------------KRLQGM--------------------- |
9 | 4bjmA1 | 0.13 | 0.10 | 3.28 | 0.65 | SP3 | | -------------------------QPEFDRGFLRPFGAKMKFLKPDQVQKLSTDDLITYMAEKDKNVR-DLAIKLRDAKQDSTKNGTPEIKQKYDKAYEKTKAAAEKLVSEESL----------- |
10 | 1r5iD1 | 0.10 | 0.09 | 3.22 | 0.56 | PROSPECTOR2 | | SMKLRVENPKKAQ-----------------KHFVQNLNNVVFTNKELEDNLSNKEETKEVLKLFKLKVNAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDESYFISQ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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