Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | NNKGSSQCGSIDDACDRALNDGFDDETIYKDYVSRYARIQSGMVMVATFGQAGCTAQFKCDDYGLGMKGKDIKDAVQHMKDNDGVSKCGTAYLSNTCQITLNYCTNC |
1 | 1kptA | 0.20 | 0.18 | 5.68 | 2.36 | SPARKS-K | | NCRGSSQCGLSGNLMVRIRDQACNQGQTWCPGERRAKVCG---------TGNSISAYVQSTNNC--ISGTEACRHLTNLVNHG-CRVCGSDPLYARGQLTVNYVNSC |
2 | 1kptA | 0.20 | 0.18 | 5.70 | 1.33 | FFAS-3D | | NCRGSSQCGLSGGNLMVRIRDQACGNQ-----GQTWCPGERRAKVC--GTGNSISAYVQ--STNNCISGTEACRHLTNLVNH-GCRVCGSDPLYAGGQLTVNYVNSC |
3 | 1kptA | 0.20 | 0.18 | 5.66 | 1.54 | HHpred | | NCRGSSQCGLSMVRIRDQ-A-CGNQGQTWCPGER-----RAKVC--G-TGNSIS-AYVQST--NNCISGTEACRHLTNLVN-HGCRVCGSDPLYSRGQLTVNYVNSC |
4 | 1kptA | 0.22 | 0.20 | 6.18 | 2.10 | MUSTER | | NCRGSSQCGLSGGNLMVRIRDQANQGQTWCPGERRAKVCGTG---------NSISAYVQ---TNNCISGTEACRHLTNLVNH-GCRVCGSDPLYAGGQLTVNYVNSC |
5 | 1kptA | 0.22 | 0.20 | 6.18 | 1.41 | CNFpred | | NCRGSSQCGLSGNLMVRIRDQACNQGQTWCPGERR-------AKVCGT--GNSISAYVQST--NNCISGTEACRHLTNLVNH-GCRVCGSDPLY-RGQLTVNYVNSC |
6 | 1kptA | 0.22 | 0.19 | 5.92 | 4.46 | HHsearch-2 | | NCRGSSQCGLSGVRIRDQ-A-CGNQGQTWCPGER-------RAKVCGT-GNSIS-AYVQ--STNNCISGTEACRHLTNLVN-HGCRVCGSDPLYSRGQLTVNYVNSC |
7 | 1kptA | 0.21 | 0.19 | 5.94 | 2.61 | Neff-PPAS | | NCRGSSQCGLSGNLMVRIRDQACGNQ------GQTWCPGERRAKVCGTGN--SISAYVQSTN--NCISGTEACRHLTNLVNH-GCRVCGSDPLYAGGQLTVNYVNSC |
8 | 1kptA | 0.21 | 0.18 | 5.65 | 5.08 | HHsearch | | NCRGSSQCGLSGVRIRDQ-A-CGNQGQTWCPGER-------RAKVCGT-GNSIS-AYVQ--STNNCISGTEACRHLTNLVN-HGCRVCGSDPLYSRGQLTVNYVNS- |
9 | 5v6iA | 0.10 | 0.08 | 3.14 | 0.97 | SPARKS-K | | DNFGNRDVAACARFIDDFCDTLTPNI--YRPRDN--------GQRCYVVNGHKCDFTVFNTNSPIRASTPNCKTVLRAAANRTG----GRGKINPPFLFAIDPNDGC |
10 | 2v7sA | 0.11 | 0.09 | 3.41 | 0.53 | FFAS-3D | | ------------RIIADRVSAAIPGQTWKFDDDPNIQQSDRNGALCDKLTADIARRPIANSVFGATFSAEDAANIVREEAAKYGATTEAKRDYGNGYEFRLNITGDC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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