Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MDVLFVAILAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDITEAVETTISLETARADHPKPVTVKPVTTEPQSPDLNDAVSSLRSPIPLLLSCAFVQAGMY |
1 | 5edfA2 | 0.20 | 0.16 | 5.18 | 0.74 | SPARKS-K | | RLLTYGVKKPSAYPEYEAYEDKRHIPENPYFHEFYYIKK----GENPAIITHRNN------RINQTEED---SYSTSVGSCING------FTVQPFIREKQQLTQQELVGYHQQVEQLVQSFVNN----- |
2 | 6em5n | 0.11 | 0.09 | 3.37 | 0.43 | FFAS-3D | | ----FRRLCIFKGIYPREPRNKKKANKGSTAPTTFYY-------AKDIQYLMHEPVLAKFREHKTFARKLTRALGRGEVSSAKRLEENRDSYTLDHIIKERYPSFPDAIRDIDDALNMLFLFSNL----- |
3 | 5zmmA | 0.21 | 0.12 | 3.65 | 0.32 | HHpred | | ----------------------------------------------------------EHDRIGPRATYFHAATSYFLEHEGRLYDHMYVWREGFTIREA-PKTFHRRVGDVRPARPVLLLWAIGQAVA- |
4 | 6mccC | 0.18 | 0.16 | 5.25 | 0.66 | MUSTER | | RKKFYQAISEFEAMTGKDVEADEVLNDAEYIAFTYLYLCTSNVEGLEDRYFLDEECLDST----FLETEDNETYYIHFLQETEFSEDDNEDELPLATEEQIE--AYDKQEELKA--------VILKKELN |
5 | 4eogA | 0.13 | 0.12 | 3.98 | 0.73 | CNFpred | | LDFYYYATYKLAEWLPVQ----------NNLEVYLDLTHGINFMPTF-LYNVKFEIVNSEPYPLGVSQEIREDTILHIREI-------GEGVVRPRPQYSPVEGKLYWNAFISNGFPLVFASFYPNIRDV |
6 | 2pffB | 0.24 | 0.24 | 7.43 | 0.48 | HHsearch-2 | | MDVLLVASFFIASQLQFENCYLEGNDIHALAAKLLFRAVGEGNAQLVAIFTDDYF-EELRDLYQTYHDLIKFSAETLSELIRTTLDAEKVFTQGLNILENFLPVASPFHSHLLVPASDLINKDLVKNNVS |
7 | 2raeA | 0.06 | 0.05 | 2.37 | 0.68 | Neff-PPAS | | -AIPWGDFDAHLAEMRAQLAAQPDDIPIVDGLTAALLQFNAFPASEEINHRKRMGLILRVPALQAYSVVMYEGWRNVIAEYVASRLGT----------SPTDHVPRTVGYLLLGVAMSAYEQWLDDDSLE |
8 | 5a8jA2 | 0.22 | 0.14 | 4.38 | 0.38 | HHsearch | | VRVSFVAAYNLTLNFSINYEMPVNIPVVDKDVNVYVGNIPPGETDYTLKVTGNYV-----DSVSNKNIEI----------------------DESLVIKR-APD-DEVRSNF------------------ |
9 | 3kwlA4 | 0.11 | 0.09 | 3.32 | 0.54 | SP3 | | IDEKAVLKNYEDFFKQVPYITKGEKEE--LEKFIQINFINPQTNP---KY-LGDGFFLYVKWLKRYPTERDRLLE--ISQPESGVNFLSVAHY----LYKNDDNIDHEIYELQEILTNS----------- |
10 | 3zc4A | 0.12 | 0.12 | 4.08 | 0.47 | PROSPECTOR2 | | PRFWTLIKLRFYVVLRRYSIDPKQIKDSSSSSRSIVIYDDPK-----NPVTAQAPCLVVAKRDEIPQNFPSIYRYTIYKIDKSSEYCISPLVVNDKYATLITPNIKEFFDKLDSNIQYARVLASLAVGGE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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