>PF15453 (390 residues) PGHARQSSSAASDQQHVNGMCRGQASPDGPSAEDMAPSFEKLNPYPAPPPPHPLYPGRKV IEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEEAGERQRTVPNSPAVSDGGWRSG TSSSSGGGHASLPRTPQQTDVTDPLSSQSSPFSSPPQPPSAFASSGSSEEDLLANWQRMF VEKMAPSSEGTLINRTSFSSETVKELHRSRNSKSGRGAADHGMMRGAYSDGEEGSSAQSW TASRESSLDTDTSSVADLRSKRGHYGGDFSQEEGEHLLMGTDNEDGASGDTMVMVESSPA SAKRQEFVEDVGSASSLTEERDVLPQDFPVVGSRVLAGLEDYTDKPPSQRQHHHHQSGSS RPHKSPKRMGVHHLHRKDSLTRAQEHGNLL |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | PGHARQSSSAASDQQHVNGMCRGQASPDGPSAEDMAPSFEKLNPYPAPPPPHPLYPGRKVIEFSSDDKVKIPKNSPLPNCTYATRQAISLSLVQNDEEAGERQRTVPNSPAVSDGGWRSGTSSSSGGGHASLPRTPQQTDVTDPLSSQSSPFSSPPQPPSAFASSGSSEEDLLANWQRMFVEKMAPSSEGTLINRTSFSSETVKELHRSRNSKSGRGAADHGMMRGAYSDGEEGSSAQSWTASRESSLDTDTSSVADLRSKRGHYGGDFSQEEGEHLLMGTDNEDGASGDTMVMVESSPASAKRQEFVEDVGSASSLTEERDVLPQDFPVVGSRVLAGLEDYTDKPPSQRQHHHHQSGSSRPHKSPKRMGVHHLHRKDSLTRAQEHGNLL | |||||||||||||||||||
1 | 5jcss | 0.08 | 0.07 | 2.81 | 1.33 | SPARKS-K | PSRGETVKAANGFQSTVRINEDHQKDSSNKIYNLNMIGMRIWNVIELEEPS-------------EEDLTHILA----------------------------QKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHTRVVSVCERLDILFKNNGINKPDQLIQSSVYDSIFSEAADCFAGAIGEFKAL---------EPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSIKIKEKLNIQKKSMNTNHSLRLMEQISVCIQMTEPVKTTVVQQLINVSQQTETGDLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQ | |||||||||||||
2 | 2nbiA | 0.14 | 0.14 | 4.87 | 1.16 | MUSTER | PDCDVLPTPQNINCPRCATECRPDNPMFTPSPDGSPPISPTMLPTNQPTPPEPSSACGEVIEECPLDTCFLPTSDPPPDCTAVGRPDCDVLPFPNNLPACCPFECSPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPFLPYGDSSRPLDCTDPA-RPDCDVLPTPQNINCPACCAFERPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTRQPSSQPTGPQPSSQPSECADVLELCPYDTDDSSRPPDCTDPSVNRPDCLSTAIDFTCPT | |||||||||||||
3 | 3iymA | 0.10 | 0.09 | 3.45 | 2.36 | Neff-PPAS | -AAAFAQGGSSDPVPMPGKYPVVFSTGAGEPTRDQEFALPVHKAFPLGSVSDKYRRNPRYAEF--------RAHSEFTDGVFGTHLAVSLRLAQQLVHAHVNMGLPLGDFAPLASSDVRIPSALASVVNQFGEFSSPSIGTRFLLRDFEHAVSRVVFLADQLWTNGNSHHIFARSWLPMSNNDGNFKTIVASRLLEFISAGDLSILPTVLEDAVLSGEVPEAWEQVKDLLGDAPGVGQVDRRDRFDFLFKSYADVGQ-------FTTAFTTQAASDVLTELGLPWNSPSAGHLNWQYSTKQRFTFLADTWAKLSAAYSQFFELSSGLATRQSATGSHAQMVDLTSVEGVTVLKAALALSAPEFSLAACFPPSCIFVGGLTRRVVVTTSLS | |||||||||||||
4 | 2nbiA1 | 0.11 | 0.10 | 3.65 | 1.69 | PROSPECTOR2 | QPSDLNPSSQPSECADVLEECECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPIC-----------SPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNNLGCPACCPFECSPDNP---------MFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARPPDCTAVGRLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNAVTVPLTPAPSSAPTR | |||||||||||||
5 | 4btgA | 0.12 | 0.11 | 3.92 | 1.09 | SPARKS-K | QFTEYHQSTACNPEIWRKITGSSNRAI-KADAVGKVPPLEQLRT--LAPSEHELFPDAAYV-------YRVGRTATYPNF-YALVDCVRASDLR-------RMLTALSSVDSKMLQATFKAKGALAPAANAATTAFERSRGNFDANSPSTPKELDPSARLRNTNGIDQLRSNLAAYQDMVKQRGRAESDEELSSTSPFKLRPINETTSYIGQTSAIDHMGQPSHVVVYEDWQFAKEITAFTPVKLANDVEPGISDRMSATLAPIGNTFAVSAFVKNRTAVYEAVSQRGTVNERDYALDRDPMVAIAALRTGIVDESLENDLKRSMFNYAAVMHYAVAHNPEVVQGVAAEQGSLYLVWNVRTELRIP--VGYNSIRTPEPL-EAIAYNKPI | |||||||||||||
6 | 5kcs1w | 0.10 | 0.09 | 3.39 | 0.67 | FFAS-3D | ----SIRFQNCSLFPLYHG-----SAKSNIGIDNLIEVITNKFYSSTHRGPSELKRQRRLYSLHLRDSVRVSEKE---------KIKVTEMYTSINGELCKIDRAYSGEIVI--------------LQNEFLKLNSVLGDTKLLPQRKKIENPHPLLQTTVEPSKPEQREMLLDALLEISYYVDSTTHEIILSFLGKVQMEVISALLQETIHIEVPPNPFWASIGLSVSPLPLGSGMQYESSVSLGYLNQSFQNAVMEGIRQGLYGWNVTMLAPIVLEQVLKKAGTELLEPYLSFKIYAPQEYLSRAYNDAPVDTQLKNNEVILSGEIPARCQEYRSDLTFFTNGRSVCLTELKGYHVTTGEPVCQPRRPNSRIDKVRYMFNK------- | |||||||||||||
7 | 5f4jA2 | 0.24 | 0.04 | 1.28 | 0.34 | HHpred | -----TAQNNNLNVQCQNGRCTLDGELQGTT---------------LAPPIAPNFPGEQLLFFRSN----VP------CAGGVSDGVIDCLLPQEWIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
8 | 6fmlG | 0.10 | 0.10 | 3.59 | 1.08 | MUSTER | PSLFDSHDE----SEWFSKDIESHAQSNTKLNEDQLKRLHMLKPF------QKELGDKIEIDVFCEISIMDLDSATLMNLVMQFRKVCN------PDLFERADTSSPFFCGHFAETGSFLREGTNVALGYSTRSLVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRAVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDSLAKDELLRELKEGGHLL | |||||||||||||
9 | 2ijgX | 0.08 | 0.02 | 0.80 | 0.36 | CNFpred | ----------------------------------------------------------VTILWFRN-DLRVLDNDALYKAWSSSDTILPVYCLDPR----------------------------------------LFHTTHFFNFPKTGALRG-------------FLMECLVDLRKNLMKR------LNLLIRSGKPEEILPSLAKDFGART-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 1z8fA1 | 0.23 | 0.02 | 0.64 | 0.50 | HHsearch-2 | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSATTRCPRPGEVDGVDHFIDPTRFQQLIDQGELL | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |