>PF15445 (452 residues) IPVGIALALTSIAFLYLKKKTKSSVGNLFQILQIPKSDYDIPTLKSSNRYIPYASDTYKG KTYIYMEGDTSGDEKYAFMSDTTDITSSESEYEELDINDIYAPRAPKYKTLIEVVLEPSG NNTTASGKNTTASGNNTPSDTQNDIQNDGIPSSKITDNEWNTLKDEFISQYLQSEQPKDV PNDYKSGNSSTNTNITTTSRHNVEEKPFITSIHDRNLYTGEEISYNINMSTNSMDDPKYV SNNVYSGIDLINDSLNSGNQHIDIYDEVLKRKENELFGTNHVKQTSIHSVAKLTNSDPIH NQLELFHKWLDRHRNMCEKWEKHNKEEVLDKLKEEWENKTHSGNTHPSDSNKTLNTDVSI QIDMDNPKPINQFTNMDTYPNNSSMDTILDDLDKYNDPYYDVQDDIYYDVNDHDASTVDT NAMDIPSKVQIEMDVNTKLVKEKYPIADVWDI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 340 360 380 400 420 440 | | | | | | | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | IPVGIALALTSIAFLYLKKKTKSSVGNLFQILQIPKSDYDIPTLKSSNRYIPYASDTYKGKTYIYMEGDTSGDEKYAFMSDTTDITSSESEYEELDINDIYAPRAPKYKTLIEVVLEPSGNNTTASGKNTTASGNNTPSDTQNDIQNDGIPSSKITDNEWNTLKDEFISQYLQSEQPKDVPNDYKSGNSSTNTNITTTSRHNVEEKPFITSIHDRNLYTGEEISYNINMSTNSMDDPKYVSNNVYSGIDLINDSLNSGNQHIDIYDEVLKRKENELFGTNHVKQTSIHSVAKLTNSDPIHNQLELFHKWLDRHRNMCEKWEKHNKEEVLDKLKEEWENKTHSGNTHPSDSNKTLNTDVSIQIDMDNPKPINQFTNMDTYPNNSSMDTILDDLDKYNDPYYDVQDDIYYDVNDHDASTVDTNAMDIPSKVQIEMDVNTKLVKEKYPIADVWDI | |||||||||||||||||||
1 | 5voxO | 0.07 | 0.06 | 2.35 | 1.14 | SPARKS-K | -----------------MATALYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASKIIEILQGLNETST--------NAYRTLPINNMPVPQTRKFKLDKSIKDLITLISNESSQLDADVRATYANSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVKSLKSDFEKSYETLSK--NVVPASASVIAEDAEYVLFNVHLFKKN----------VQEFTTAAREKKFIPREFNYS--------------EELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHGLPPHF----------NIKIIAVPPKNL------------SKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYALVDTEYEPFVMYIINL----------------- | |||||||||||||
2 | 2lklA | 0.61 | 0.10 | 2.98 | 1.40 | FFAS-3D | ------------------------------------------------------------------------------------------------------------------------------------------------------SMNKFTDDEWNQLKQDFISGILENEQ----------------------------------------------------------------------------------------KDLVAKL----------------------TNSDPIMNQLDLLHKWLDRHRDMCEKW--KSKEDILHKLNEQWNKD----------------------------------------------------------------------------------------------------------------- | |||||||||||||
3 | 5mzaA | 0.13 | 0.09 | 2.98 | 4.24 | HHpred | --------------------AKPHGKKLATVKQIAQYYKRKAYIQLNER-GSRSALKGDASQGQYDRGGKADDFK----TKLCEINEKHSNA------------------------R-SNSLNPCNGKDN-------------------NKVRFNVGTPWQSGEKTATDVYLPRRQHFCTSNLEYLINGGHHSFLGDVLLAAKYQAQHTMKDYKSK-----NDKEGI-----C-RAIRYDIGDIIKGTDLWDKDGGEQNHLVTIFDKIWEANRDQVWKAMQCGNDNPCS--GESDHTPLHDYIPQRLRWMTEWAEECATCKEAEYNKEIKKWEQQWDAISYKYLITANGGPGYYNT--------------------EVQEEDKPVVDFLYNLYLQ--------------------------------------------------------- | |||||||||||||
4 | 1r70B | 0.12 | 0.10 | 3.69 | 0.79 | MUSTER | VSCKAGYSFTSYGLHWVRQAPGQRLEWMGWI--SAGTGNTKYSQKFRGRVT-FTRDTSATTAYMGLSSLRPEDTVYYCARDPYGGGKSEFDYWGQGTL-VTVSSASPTS----PKVFPLSLDSTPQDGNVVVQGFFPQEPLSQNVTARNFPPSQDASGDLYTTSSQLT---LPATQCPDHVKHYTNPSQDVTVPCPVPPPPPCCHPRSLHRPALEDLLLGSEA--NLTCTLTGLRDASGAT---FT---TPSSGKSAVQGPPERDLC----------GCYSVSSVLPGCAQPWNHGETFT----------------CTPELKTPLTANITKSGN--TFRPEVHLLPPPSEELALNELVTLTCLARFSPKDVLVRLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKVGHEALPLAFTQKT---IDRLAGKPTVNVSVV-DG | |||||||||||||
5 | 4k2uA | 0.10 | 0.02 | 0.74 | 0.55 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HLAMGNDMDFGGYSTENKIQEVFK-WWNEFREKLWEAMLSEHKN---NINNCKNIPQ--EELQITQWIKEWHGEFLLERDNRYRDWIIRSKFEWHTLSK--------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 5mzaA | 0.13 | 0.10 | 3.52 | 1.91 | HHsearch-2 | ------------------SNPCAKGKKLATVKQIAQYYKRKAYIQLNER-GSRSALKGDASQGQYDRGGKADDFK----TKLCEINEKHSNA------------------------R-SNSLNPCNGKDN-------------------NKVRFNVGTPWQSGEKTATDVYLPRRQHFCTSNLEYLINGGHHSFLGDVLLAAKYQAQHTMKDYKSK-----NDKEGI-----C-RAIRYDIGDIIKGTDLWDKDGGEQNHLVTIFDKWWEANRDQVWKAMQCGNDNPCS--GESDHTPLHDYIPQRLRWMTEWAEECATCKEAEYNKEIKKWEQQWDAISYKITAI-NGGPGYYNTEVQ-----EEDKPVVDFLYNLKPPPHRVKATPYSTAAGYIEAHI--GDCQKQTQFCKNKNGEADAFRDKPHDHDTACK-------C---------- | |||||||||||||
7 | 2bsgA | 0.09 | 0.08 | 2.83 | 1.53 | Neff-PPAS | --------------------------------------------DIVLNDLPFVDGPPA-------EGQSRISNGEEILGADTQYGSEGS----MNRPTVSVLRNV-------EVLDKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRELMKHRIINNTDVITSQGIRLSLTIEVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISIITSVNTNTDNIASINLEIK-------QRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLN----------------NAVQNLQVEIGNNSAGIKGQVV-ALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRD-------GQAYVRKDGEWVFLSTF | |||||||||||||
8 | 5mzaA | 0.13 | 0.10 | 3.37 | 3.10 | HHsearch | ------------------SNAKPHGKKLATVKQIAQYYKRKAYIQLNER-GSRSALKGDASQGQYDRGGKADDFK----TKLCEINEKHSNA------------------------R-SNSLNPCNGKDN-------------------NKVRFNVGTPWQSGEKTATDVYLPRRQHFCTSNLEYLINGGHHSFLGDVLLAAKYQAQHTMKDYKSK-----NDKEGI-----C-RAIRYDIGDIIKGTDLWDKDGGEQNHLVTIFDKIWEANRDQVWKAMQCGNDNPCS--GESDHTPLHDYIPQRLRWMTEWAEECATCKEAEYNKEIKKWEQQWDAISYKYLITANGGPGYYNT--------------------EVQEEDKPVVDFLYNLYLQATPYSTIHQEAHQTQFCKNKNGEADPAFDKPHDHDTACKC----------------- | |||||||||||||
9 | 2nbiA1 | 0.09 | 0.08 | 3.00 | 1.49 | PROSPECTOR2 | QP--------------SDLNPSSQPSECADVLEECPIDECFLPYSDASRPPSCLSFGRP-------DCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTM-------LPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPD--CDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPNCSP-------TMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACCAFECRPDNPMFTPSP---------------------------------DGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDALPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLSSAPTR | |||||||||||||
10 | 5mzaA | 0.13 | 0.07 | 2.52 | 2.13 | SAM | ---------------------------LATVKQIAQYYKRKAYIQLNER-GSRSALKGDASQGQYDRGGKADDFKK-----LCEINEKHSNA------------------------RS-NSLNPCNGKDN-------------------NKVRFNVGTPWQSGEKIATDVYLPRRQHFCTSNLEYLINGGHHSFLGDVLLAAKYQAQHTMKDYKSKN-----DKEGI-----C-RAIRYDIGDIIKGTDLWDKDGGEQNHLVTIFDKIKAANRDQVWKAMQCGNDNPCS--GESDHTPLHDYIPQRLRWMTEWAEECATCKEAEYNKEIKKWEQQWDA------------------------------------------------------------------------------------------------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |