Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | PSNQVRKNRRNASEPISGAPRAKSQPQNPECLLAGEVVVCSAAVSDGAPVNVAKHPNSEPQKAASRRTCKTESHGQEKKRRSRENPSKKAGESKQPGNKVQAEEKPTIPRKNRKKNQPDLSQEVFKKPRSSLGMHMLESVQVFHALGKK |
1 | 6em5l | 0.06 | 0.06 | 2.63 | 1.14 | SPARKS-K | | LTEEETKVFEKLAGYIGRNISFLVDNKELPHVFKDRVYYVPDHVAKLATSVARPNLMSLGICLGKFTKTGKFRLHITSLTVLAKHAKYKIWIKPNGEMPFLYGNHVLKAHVGKMSDDIPEHAGVIVFAMNDVPLGFGVSAKSTSESRNM |
2 | 1zvoC | 0.11 | 0.11 | 3.89 | 1.11 | MUSTER | | QHTASKSKKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATVGSDLKDAH-EVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWN |
3 | 1w9rA | 0.15 | 0.11 | 3.87 | 1.72 | Neff-PPAS | | -SHMPEKKVAEAEKKVEEAKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEEDKVKEKP------------------------------- |
4 | 6emkG | 0.07 | 0.07 | 2.79 | 1.09 | SPARKS-K | | -SSLHYASYHGRYLICVYLIQLGHDKHELIKTFKGNTCVHLA-LMKGHEQTLHLLLQQFPRF--INHRGENGRAPIHIACMNDYYQCLSLLIGVGADLWVMDTNGDTPLHVCLEYGSISCMKMLLNEVRDKGNWKPIDVANIYSKVLKE |
5 | 2awbD | 0.14 | 0.11 | 3.65 | 0.30 | FFAS-3D | | ----VEAGRGLWEFRLAEGEEFTVQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERN--------------------------------- |
6 | 3k9vA | 0.17 | 0.09 | 3.08 | 0.32 | HHpred | | ----------------PSVPFTRTLDKPTYALPKGTVLTLNTQVLGSSEDNFED-----SHKFRPERWLQK-------------E-----------K-K----INP-------FAH------LPFGGKRMCIGRRLAELHLALC----- |
7 | 2cseW | 0.15 | 0.14 | 4.74 | 1.07 | MUSTER | | RARPGIASVQRATESAE-LPMKNNDEGTPKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSK--HPAYQCHVCSAVLFSP-LDLDAHVAS-----HGLHGN |
8 | 1as0A | 0.13 | 0.03 | 0.93 | 0.37 | CNFpred | | ----------------------------------------------------------------------------------------------------------------------GYSEEECKQYKAVVYSNTIQSIIAIIRAMGR |
9 | 1ztnA | 0.43 | 0.04 | 1.18 | 0.48 | HHsearch-2 | | ---------------------------------------------------------------------------------------------------------------------------------------MISSVCVSSYRGRK |
10 | 4b03D | 0.08 | 0.07 | 2.89 | 1.33 | Neff-PPAS | | -----------SKQERGKSLLFKTSAGVNMCTLIAMDLGELCEDTMTYKCPRITETEPDDVDCWCNATETWVTYGTCSQTGEHRRDKRSVALAPHVGLGLETRTETWMSSEGAWKQIQKVETWALGHPGFTVIA-----LFLAHAIGTS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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