Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | RSGIKKFFYPRSCQGKMWDREACGGQAAIEDPTLCLQLHCCYQEGICYHQRLDENMRKKHLWTLSLTCIGLLLLIFLACFFWWAKRRGLYKNMKMPARLSHFRKSKVSGNVSNSTTNSFSLQKKEQSPLLAR |
1 | 5oqdB | 0.11 | 0.11 | 3.86 | 0.86 | SPARKS-K | | GKPGKFDHNMLQCCKRNWFHTQCMQNFKKKLLRMFFVFCCCNNGIEFVRRMQIEWVDVLHIALYNLRKHIWPFILEQLPIALMERLKQTLKDYS-DRFVCGREFKRAPAFYALRIPKVFLEPHEELSDELLE |
2 | 3g61A1 | 0.14 | 0.08 | 2.58 | 0.37 | FFAS-3D | | ----------------------------------------------------AKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCRQKFFHAI-MNQEIGWFDVHDVGELNTRLTDDVSKINE--------- |
3 | 5kzwA1 | 0.18 | 0.13 | 4.19 | 0.44 | HHpred | | ---------PTQCDVPPNSRFDCAPDK-AITQEQCEARGCCYIPAWCFFPPSYPSYKLENLSSMGYTAT--L---TRT-------TPTF-----FPKD-----ILTLRLDVMMETENRLHFTIKDP------ |
4 | 1f6gA | 0.08 | 0.08 | 3.01 | 0.64 | MUSTER | | WAAAGAATV-AGSYL-AVLAERGAPGAQLITYPAALWWSVETATTVGYGDLYPVTLWGR-CVAVVVMVAGITSFLVTAALATWFVGREQERRGHFVRHSEKAAEEAYTRTTRALHERFDRLERMLDD--NRR |
5 | 1m56A | 0.09 | 0.02 | 0.87 | 0.59 | CNFpred | | -------------------------------------------------------LYQHILWFFGHPEVYIIVLPAFGIVSHVIATFAK------------------------------------------- |
6 | 1pcpA | 0.23 | 0.10 | 3.08 | 0.78 | HHsearch-2 | | VPGVPWCFKPLECVMQVSARKNCGYP--GISPEDCAARNCCFSDTWCFFPMSVEDCHY-------------------------------------------------------------------------- |
7 | 4q2sA | 0.15 | 0.13 | 4.36 | 0.74 | Neff-PPAS | | ---------------IAESLRRLKEYVKAGSVKECVAEWCSVAGFDVLSEISYDRMLENCSNLLLLTFIYHISLLDSVDDDRLSKRMEYISRICLNIDVNDPKVETVVHPVLTLTREALLRQSEFFSPIFKR |
8 | 1pcpA | 0.23 | 0.10 | 3.08 | 0.89 | HHsearch | | VPGVPWCFKPLECVMQVSARKNCGYP--GISPEDCAARNCCFSDTWCFFPMSVEDCHY-------------------------------------------------------------------------- |
9 | 6etxG | 0.08 | 0.08 | 3.25 | 0.62 | SP3 | | KAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSYALDVLLTR |
10 | 3ikmA2 | 0.06 | 0.06 | 2.64 | 0.44 | PROSPECTOR2 | | TASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARAGYLVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHCLEQGKQQLMPQEAAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIPGGPG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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