Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | MFENLNTALTPKLQASRSFPHLSKPVAPGSAPLGSAEPGGPGLWVGSSQHLKNLGKAMGAKVNDFLRRKEPSSLGSVGVTEINKTAGAQLASGTDAAPEAWLEDERSVLQETFPRLDPPPPITRKRTPRALKTTQDMLISSQPVLSSLEYGTEPSPGQAQDSAPTAQPDVPADASQPEATMEREERGKVLPNGEVSLSVPDLIHKDSQDESKLKMTECRRASSPSLIERNGFKLSLSPISLAESWEDGSPPPQARTSSLDNEGPHPDLLSFE |
1 | 4btgA3 | 0.09 | 0.09 | 3.37 | 1.20 | SPARKS-K | | NQLSVGALQLPLQFTRTFSASMTSELLWEAYVYRVGRTATYPFDANVSSVLTILGRLWSP--STPKELDPSARLRNTGISNLALFIAYQDMVKQRGRAE-VIFSDEELSSTIIPEVSPFKLRPINETTSYIGQTSMGQPSHVVVYEDWQFAKEITAFTPVKLANNSNQRFLDVEPGISDRMSATLAPIGNTRGTVNSNGAEMTLGFPSVVERDYAAALRTGIVDESLEARASNDNYYAAVMHYAVAHNPEVVVSEHQGVAAEQGSLYLV-WN |
2 | 6fmlG | 0.11 | 0.11 | 4.07 | 1.25 | MUSTER | | LFERADTSSPGHFAETGSFLREGTNVALGYSTRSLVEYRLPGGRLDKPGPGNLVAGFRSKYLNHMMNIWTPENIRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAV--IERENIMFHPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTD |
3 | 2tmaA | 0.08 | 0.08 | 3.07 | 2.03 | Neff-PPAS | | --KKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVT--NNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEE |
4 | 2nbiA1 | 0.08 | 0.08 | 3.28 | 1.29 | PROSPECTOR2 | | YSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPDCDVLPFPNPDNPMFTPSPDGSPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQRPDNPMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIELPKSDSARPPDCTAVGRPDCNVLPFPNNIGCPSTPSPDGSPPNCSPTMLPSPSPSAVTVPLTPAPSSAPTR |
5 | 5jcss | 0.10 | 0.10 | 3.76 | 1.17 | SPARKS-K | | LISTVRINEDLNMIGMRIWNVIELEEPSEEHILAQKFPILTNLIPKLIDSYKNVKSIYMNTKFISLNKGAHT--RVVSVRDLIKLCERLDILFKNNDQLIQSSVYDSIFSEAADCFAGAIGEFKALEPIIQAIGESLDIASSRISLFLTQHVPTLENLDDSQKKSMNSTLFAFTNHSLRLMEQISVC--IQMTEPVLLVKDLLATFSLKKNEKFHKMLHRCFNKNQWKNKLWNEAYKMAQSILKITNTENENENRLNTHEKKLLLDKWADFN |
6 | 4bmlA | 0.07 | 0.07 | 2.82 | 0.50 | FFAS-3D | | LVRSYDLRGGKSKQFMFTGKLSAGYHTPGTPIVGDAGIKANEKTLVRAEVSKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSAP--QEGRVAVLSPRQYYSLISSVDTNILNREIGNSQGDMNSGKGLYSIARILKSNNLAGLYGQDLSSAAVTGENNDYQVDASAIFHREAAGCIQSVAPTIQTTSGDFNVQYQGDLIVGK-LAMGCGSLRTSVAGSFQAA--------------- |
7 | 6chjA2 | 0.17 | 0.08 | 2.53 | 0.38 | HHpred | | -----------------------KDPAPRCMLNQKITSRRFAAQSWCLKRIRAVCEAYGTTVNDVVRTDALP-EKPLAFVPVG-VILASLHTDVQEAGERLMEEAKQ-RYVNYTALTLAPAAFH-LLTGLAWQTFNVVISNVPGPSRP---------------------------------------------------------------------------------------------------------------------------- |
8 | 2nbiA | 0.15 | 0.15 | 5.07 | 1.23 | MUSTER | | DLNPSSQPSECDVLEECPIDECFLPYSDASRPPSCLSFGRPDCDVLPTPQNINCPRCCATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEEECPLDTCFPTSDPARPPDGRPDCDVLPFPNNLGCPACCPFECSPDNPMFTPSPDGSPPPTPQPSTPTVITSPAPSSQPSQCAEVIPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPACAFECRPDNPMFTPSPDGSPPICSPTMMPSPEPQPSDCGIE |
9 | 5cioA | 0.11 | 0.03 | 0.94 | 0.48 | CNFpred | | --------------------------------------------------LRVLARLYAPRYFQRLRVERNVGVVQCTFHRCTHVEGLLFALQSPTFTAEQLRQLTDEFLQQMHHE------------------------------------------------------------------------------------------------------------------------------------------------------------ |
10 | 2v0fA | 0.26 | 0.06 | 1.82 | 0.43 | HHsearch-2 | | ------------------------------------------------------------------GSRNPNKLGEERVPVVNKRNGKKMGGAMAPPLPRWLEESGFVPESMFDRLLTGP-VVRGEGAS----------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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