Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | TSCSDDDDSSNGLDNQAPVITINEPTLDEVFAVGGEVHLDVDLEDDVELASYKIEVHNNFDGHTHGRPSGIVETIPWSFNHTEELEPGQTNHHLHEHLEVPENAAEGAYHLGIIALDQAGNQTEAYVEIII |
1 | 3pddA1 | 0.19 | 0.12 | 3.95 | 1.16 | FFAS-3D | | ------------------MVTIDSPVAGERFEAGKDINISATVKSKTPVSKVEFYNGD---------------------TLISSDTTAPYTAKI-------TGAAVGAYNLKAVAVLSDGRRIETPVLVKV |
2 | 5eq2A1 | 0.21 | 0.18 | 5.59 | 1.28 | MUSTER | | ---------RRATDTTPPTITV---PSDIIAYRGEEFEFYFEITDDSGVKNIELSTFGKPLGLNWLEYSEDNFNVP-------GNATSDNPLRVRVHGTVPLNEPIAQFTRTIRAWDAAGNVSS-NITFVI |
3 | 4be5A | 0.15 | 0.12 | 4.09 | 1.20 | CNFpred | | -----------------LTIDIKNQFGINSVESGGFVPFTVDLNNGRGEANVEFWMTAVGP---------DGLIIPVNAREKWVIAS-GDTYSKVRGINFDKSYPAGEYTINAQVVDISGERVEQSMTVVK |
4 | 3qd1X2 | 0.19 | 0.15 | 4.92 | 1.09 | HHsearch-2 | | -------------DTERPVVNVPS---EITVYRGESFEYFATVTDNSNAFDAKTVVRWLYSNQ-----PG--RGTEWL-Q--Y-SVTQVGNQLKVRFGNVPIDTTIGDYTRYVVATDAAGNVNATQTEMGN |
5 | 5eq2A1 | 0.21 | 0.18 | 5.58 | 1.18 | Neff-PPAS | | ----------RATDTTPPTITVPS---DIIAYRGEEFEFYFEITDDSGVKNIELSTFGKPLGLNWLEYSEDNFNVP-------GNATSDNPLRVRVHGTVPLNEPRAQFTRTIRAWDAAGNVSS-NITFVI |
6 | 5eq2A1 | 0.20 | 0.16 | 5.12 | 1.34 | HHsearch | | ---------RRATDTTPPTITVPSD---IIAYRGEEFEFYFEITDDSGVKNIELSTFGKPL------------GLNWLEY-SEDNFNTSDNPLRVRHGTVPLNEPRAQFTRTIRAWDAAGNVS-SNITFV- |
7 | 3pddA2 | 0.16 | 0.11 | 3.54 | 1.12 | FFAS-3D | | ----------------KPTVKLTAPKSNVVAYGNEFLKITATASDSDGISRVDFLVDG---------------------EVIGSDREAPYEYEWK--------AVEGNHEISVIAYDDDDAATPDSVKIFV |
8 | 3qd1X2 | 0.16 | 0.13 | 4.31 | 1.15 | MUSTER | | -------------DTERPVVNV---PSEITVYRGESFEYFATVTDNSNFDLAKTVVRWLYSNQPGRGTEW----------LQYSVTQVGNQLKVRIFGNVPIDTTIGDYTRYVVATDAAGNVNATQTEMGN |
9 | 4d93A | 0.14 | 0.11 | 3.67 | 1.07 | CNFpred | | -----------------FYIVENLP---YSIKRGEAVVLQFTLFNNLAEYIADVTLYNVANQTEFV----GRPDTDLSYTKSVSVPP--KVGVPISFLIKAR--KLGEMAVRVKASIMLHETDALEKVIRV |
10 | 3qd1X2 | 0.17 | 0.14 | 4.52 | 1.11 | Neff-PPAS | | -------------DTERPVVNVP---SEITVYRGESFEYFATVTDNSNAFDLAKTVVRWLYSNQPGRGTE---------WLQYSVTQVGNQLKVRIFGNVPIDTTIGDYTRYVVATDAAGNVNATQTEMGN |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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