Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | QKGILYQKPKKHAVFSKYYIVLIPGFLILFNCFHRSTTGFAKNVIDYNHYLTIPISECYLYSGTTTELDLLRRDHTFDIINPGNHAIPRAYDDGWKSTENESSRCFTLWFGTKRAIAKYSKMQEHKAEHAEESVTDSDGEYVKNKNYESNPGTLRLVNRLGVSGRSMVFMARSRQERDLWVVSIYNEL |
1 | 2y7bA | 0.13 | 0.09 | 2.93 | 1.22 | SPARKS-K | | ERGFLTIFESGFGAWHRRWCVLSGNCISYWTYPDDEKRKNPI--------GRINLANC--------------TSRQIEPANRE--------------FCARRN-TFELITVRPQ-------------------------------REDDRETLVSQCRD-TLCVTKNWLSADTKEERDLWMQKLNQVL |
2 | 1v88A | 0.17 | 0.10 | 3.34 | 1.18 | MUSTER | | MADWLKIRGTL-KSWTKLWCVLKPGVLLIYK---TQKNGQWV--------GTVLLNACEII-------ERPSKKDGF---------------------------CFKLFHPLEQSIWAVKGPKGEAVGSITQPLPS----------------------------SYLIIRATSESDGRCWMDALELAL |
3 | 1b55A | 0.12 | 0.07 | 2.63 | 1.28 | CNFpred | | LESIFLKRSQQPLNFKKRLFLLTVHKLSYYEYDFE-------RGRRGSKKGSIDVEKITCVETVV-----------PEKNPPPERQIPRR-MEQISII-ERFPYPFQVVYD----------------------------------------------------EGPLYVFSPTEELRKRWIHQLKNVI |
4 | 1v88A | 0.16 | 0.10 | 3.19 | 1.56 | Neff-PPAS | | MADWLKIRGT-LKSWTKLWCVLKPGVLLIYKTQKNGQ-----------WVGTVLLNACEII----------------------------------ERPSKKDGFCFKLFHPLEQSIW----------------------------AVKGPKGEAVGSITQPLPSSYLIIRATSESDGRCWMDALELAL |
5 | 1v88A | 0.16 | 0.10 | 3.19 | 1.19 | SPARKS-K | | MADWLKIRGTLKS-WTKLWCVLKPGVLLIYK---TQKNGQ--------WVGTVLLNAC-----------------EIIERPSKKDGF-----------------CFKLFH-------------------------PLEQSIWAVKGPKGEAVGSITQPLPSSY---LIIRATSESDGRCWMDALELAL |
6 | 3tfmA | 0.11 | 0.11 | 3.81 | 0.95 | FFAS-3D | | -HSFLYMNGGLMNSWKRRWCVLKDETFLWFWLHNNGGGSSTLSRRNWKKRWFV-LRQSKLMSEEKLKGTVEVRSAKEIIDNTNKENGIDIIMADHLIAESPEDA--SQWFSVLSQVHSSTDQEIREMHDEQANPQNAVGDSVCASDSPDRPNSFVIIT----ANRVLHCNADTPEEMHHWITLLQ--- |
7 | 6bbpA3 | 0.14 | 0.09 | 2.90 | 0.96 | HHpred | | REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTDK-----------EPRGIIPLENLSIREVE----------------------------------DPRKPNCFELYNPSHKGQVIKACKT------------------------------EADGRVVEGNHVVYRISAPSPEEKEEWMKSIKASI |
8 | 3tfmA | 0.11 | 0.11 | 3.81 | 1.15 | MUSTER | | FHSFLYMNGGLMNSWKRRWCVLKDETFLWFRSKQEGGGSSTLSRRNWKKRWFV-LRQSMYFENDSEEKEVRSAKEIIDNTNK-ENGIDIIMADRLIAESPEDASQ---WFSVLSQVHSSTDQEIREMHDEQANPQNAVGTSVCASDSPDRPNSFVIIT----ANRVLHCNADTPEEMHHWITLLQR-- |
9 | 1btkA | 0.09 | 0.05 | 2.03 | 1.25 | CNFpred | | LESIFLKRSQQPLNFKKCLFLLTVHKLSYYEYDFE-------RGRRGSKKGSIDVEKITCVETVV--------------PEKNPPPERQI--EQISII-ERFPYPFQVVYD----------------------------------------------------EGPLYVFSPTEELRKRWIHQLKNVI |
10 | 6bbpA3 | 0.15 | 0.09 | 3.04 | 0.72 | HHsearch-2 | | REGWLLKLGGRVKTWKRRWFILTDNCLYYFEYTTD-----------KEPRGIIPLENLSIREVE----------------------------------DPRKPNCFELYNPSHKGQVIKAC--KT-----------------------EADG-----RVVEGNHVVYRISAPSPEEKEEWMKSIKASI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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