Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SIIPNNIRHKFGSTVVDQLVSEEQARRAIGEVFEGQKRTSSWSSRTQSPVKISSIFSDYYDLGYNMRSNFFRGPPQETKSLMQASYTPEVIEKSVRDIEHWHGRKTDDLGRWHQKNAMNMNLQKALDEKYGEKSKSR |
1 | 6n1lA | 0.08 | 0.07 | 2.91 | 0.74 | SPARKS-K | | ---RYQSYLEGVKYNVDSAIQITKIYNTYTLFSTKLTQMYSTRLDNFAKAKAKEEAAKFKTLLNYIQVSVKTAANFVY---INDTHAKRKLENIEAEIKTLIKEQSNLYEAYKAIVTSILLMRDSLKEVQGIID--- |
2 | 3qavA2 | 0.09 | 0.08 | 3.10 | 0.61 | FFAS-3D | | -LFPSDTTIR---AKVYQRMFESNISTNVMEFVQYKMKNKDSIDQVLLKEKKDKAHVELGHWENYLKQTFVAT---KEFTMADVFFFPMVALIVRQGAN--LKDSYPNIFKYYNMMMDRPTIVKTMPPHWAESDSPG |
3 | 5svdA2 | 0.11 | 0.09 | 3.13 | 0.30 | HHpred | | --LIQMCYHGVFSHVVEHVLQTIIKRKMLLNILSKESVNACYGSHMDKLWEFTAKTLYKERIARALVLET--------EKVKNSIYGRQVWKNWKL--ELYV-RKMWDWKKLIKEQEF------------------- |
4 | 5flmA | 0.12 | 0.12 | 4.15 | 0.80 | MUSTER | | RFDYTNLRRTLQEDLVKDVLSNAHIQNELEREFERMREDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKLVIVNGDDPLSRQAQENATLLFNIHLRSTLSRRMAEEFRGE |
5 | 3k49A | 0.12 | 0.09 | 3.09 | 0.56 | CNFpred | | --IYHLSTHSYGCRVIQRLLGSSEDQESILNEL----------------------KDFIPYLINYVIQYVLQQDQFTNKEMVD--IKQEIIETVA-----------NNVVEYSKHKFASNVVEKSILYGSKNQKDLI |
6 | 1vt4I3 | 0.17 | 0.15 | 4.80 | 0.70 | HHsearch-2 | | DLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRFLEQKIRHDSTAWNA----SGSILNTLQQLKF-YKPYICDNDPYERLVNAILDFLPKIEENLI---------CSK-YT-----DLLRIALMAEDEAIFEEAHKQV |
7 | 5lqxV | 0.07 | 0.07 | 2.96 | 0.92 | Neff-PPAS | | LGFIALISKTVAPLYGEMAKNRTDHVVGLLNQARADH-VNAVKTRIDQVSNLKDVVSTTKALFEMSKETAALEAEAFELKQKVAVASKSVLDSWVRYEAQVRQHEQEQLASTVISKVQSELQNAKFQDKVLAQAVEE |
8 | 3bwtA3 | 0.12 | 0.07 | 2.58 | 0.54 | HHsearch | | PRAIELSIHKFGSNVIEKILKTAIVSEPMILEILNNGGETGIQS------LLNDSYGNYKRLSEIVAPLLV-------GPIRNTPHGKRIIGMLHL----------------------------------------- |
9 | 4ri6A2 | 0.13 | 0.12 | 4.08 | 0.62 | SP3 | | SLYGTDILSK---ANIDQWVEGQTFGPPSGDLVHDLLFSSVPVDEALIKKNVDKLAKVLDIYEQKLGQTRFLAG--DEFSFADLSHLPNGDYLVNSTDKGYLFTSRKNVNRWWTEISNRESWKKVLEMRKNA----- |
10 | 6db1A | 0.06 | 0.05 | 2.28 | 0.56 | PROSPECTOR2 | | D---IDRHLVRQTVLSQGNDQYFRFVTRLSR----------ADVKIGGGTPDFAPARQSLENRQKLEEKALSPGPNPDISREVLSNWQALLEKGVVPQQLAQQGSLTAWSEHASTVTLSRAFGASAERFSHEAGALD |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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