Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | GCTSAKQVSAVPNDEEGRGKAYSNGDLYADEYKMKGVEEVKYMRGEENRVNARNQENLEKSHVQYRGKPQKEVAAANIKSNIHTSESQQEFFRMLDEKIEKGRDYCSEGE |
1 | 3hgfC | 0.12 | 0.09 | 3.21 | 1.17 | SPARKS-K | | -------------------KKIENIVTKIDKKKYIYKK-----LLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIK-KKSENMIKSMEKYIKDLDEIKE--QSPK |
2 | 3hgfA | 0.12 | 0.11 | 3.83 | 1.09 | Neff-PPAS | | -------------MVKEIEKKIENIVTKIDKKKYIYDNMKKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMNT |
3 | 1n6zA | 0.09 | 0.08 | 3.12 | 1.06 | SPARKS-K | | KSNTYRMLVLLEDDTKINKE--DEKFLKGKPKMHEFVDELILPFNVDDELNTWFDKFDAEICIPNEGHI-KYEISSDGLIVLMLDKEIEEVVEKVKKFVEENN------- |
4 | 1ulyA2 | 0.19 | 0.15 | 4.68 | 0.44 | FFAS-3D | | --------------------------VITDPEVIKVADVFYYLGDEELRYIARSRLKTKIDIFKRLGYQFEENELLNIDRSQKEFDATVRISKYIEEKEDALKDFSNED- |
5 | 1n6fA | 0.13 | 0.11 | 3.76 | 0.38 | HHpred | | ---VRGKIIAIT-----NEYAGSDGDIFSFSFKKLGLGKLIGTRTWGGVVGITPRRLIDGTVLTQFAFFGVENYGVDP--DVEIEYAPHDYLSGIDYAID---------- |
6 | 3hgfC | 0.14 | 0.11 | 3.71 | 0.92 | MUSTER | | -------------------KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSEEVKNINMSYGKSLNKLFLEKIKK-------KSENMIKSMEKYIKDLDEIKEQSPKAE |
7 | 5ijpA | 0.12 | 0.03 | 0.95 | 0.37 | CNFpred | | --------------------------------------------------------------------------------------DESRFVSKLEAELDKVHAKQQVKA |
8 | 3kxeC | 0.25 | 0.06 | 1.97 | 0.37 | HHsearch-2 | | ------------------------------------------------------------------------------NTSVVLGDHFQAF---IDSQVADG-RYGSASE |
9 | 3hgfC | 0.13 | 0.10 | 3.45 | 1.00 | Neff-PPAS | | -------------------KKIENIVTKIDKKKYKLLNEIAEIEKDKTSLEEVKNINMSYGKSLNKLFLEKI---------KKKSENMIKSMEKYIKDLDEIKEQSPKAE |
10 | 5n9jF | 0.29 | 0.06 | 1.94 | 0.54 | HHsearch | | ----------------------------------------------------------------------------------AELLSQQDFSRLLEFLASQT---ASKE- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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