Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | MDDDAAPRVEGVPVAVHKHALHDGLRQVAGPGAAAAHLPRWPPPQLAASRREAPPLSQRPHRTQGAGSPPETNEKLTNPQVKEK |
1 | 2ftcB2 | 0.15 | 0.14 | 4.80 | 0.97 | SPARKS-K | | IGRMAVAAREGDAHLINNVESERGAQYIRAAGTCGVLLRKTAIIQLPS--KRQMQVLETCVATVGRVSNVDHNKRVIGKAG--- |
2 | 1r5sA | 0.04 | 0.04 | 1.94 | 0.32 | FFAS-3D | | NYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFPDDNQNAKKVAAGHELQPLAIVDQRPSSRASSRASSRPRPDDLE-- |
3 | 4yyfA2 | 0.13 | 0.07 | 2.46 | 0.25 | HHpred | | ----QVPGLTSDPASLSPAVY-NLLRS-GGYGG----PGFGGLVY--TDDLSSGAIN--------------------------- |
4 | 6gsiI | 0.19 | 0.17 | 5.38 | 0.79 | MUSTER | | IELDKAALGQQRELALKRMKL----------DHQALNNQVEQFNKILEQRVQGPIQSVRLARAAGFRVDPYTDQNFYDDQIRLS |
5 | 5w7zA | 0.12 | 0.02 | 0.85 | 0.52 | CNFpred | | ------------KLVINRKMFADSIERIA------------------------------------------------------- |
6 | 5b00A1 | 0.32 | 0.11 | 3.23 | 0.52 | HHsearch-2 | | MDDDTGRVELAVCLRLHLRALHELESLA-------------------------------------------------------- |
7 | 3j0fI2 | 0.16 | 0.14 | 4.77 | 1.06 | Neff-PPAS | | -DPHGWPHE----IVQHYYHRHPVYTILAVASATVAMMIGVTVAVLCACKARRECLTPYA-LAPNAVIPTSLALLCCVRSANA- |
8 | 3gabA2 | 0.17 | 0.14 | 4.68 | 0.37 | HHsearch | | MHGTLAQNENG-LYIIDQHAAQERIKEKVGENR------HLRNDELLDDLRSTSDPFTCPH---G---RPI-IIHHSTYEMEK- |
9 | 2k5jA | 0.13 | 0.12 | 4.15 | 0.61 | SP3 | | MNSLAGIDMGRILLDLS-NEVIKQLDDL----EVQRNLPRADLLREAVDQYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREE |
10 | 1zvoC2 | 0.09 | 0.06 | 2.27 | 0.51 | PROSPECTOR2 | | AQASSVPTAQ----------------------------PQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPEC |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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