Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | GSGAHYALCALGLGLIALGVVMIVWTVVPMDGEASSGSTTTPASNSSNPGDGGDEVQKDTTKSSTIAMVLVAVGAILLVLSISLGFRNKRRARARGNQTTAAVLLASGLPERQEEPAVDPAAFSVPSYDEVVGSGEFPVRQSNLRQSTSQLPSYEDIIAAVENEGADPAENSRLTGSTKAPAPSAPARSSSRASRLLRPLRVRRIKSDKLHLKDFRLQIRSPTQNPVTIEPITPPPQYD |
1 | 3j3iA | 0.10 | 0.10 | 3.71 | 1.10 | SPARKS-K | | NPGLVYSSILTYADLLQEAQIIACSLQENRYFSRIGLPTVVSLYDLMVPAFIAQNSALEGARLSGDLSKAVGRVHQMLGMVAAKDIISATHMQHGIRQYLNSSKLTGIGLFDATPQMRIFSEMDTADYADMLHLTIFEASVCTDNGPISFLAGYDVLVEELTLANIRIEHHRWVAAKRDSALRLTPRSRTAHRVDMVRECDFNPTMNLKAAGPKARLRGSGVKRRRVSEVPFRSPPRRE |
2 | 6e5p2 | 0.10 | 0.08 | 2.96 | 1.23 | Neff-PPAS | | -----------------ISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGTVSRDDLEDFVYLQMHKM------------------------RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS--- |
3 | 5yfpC2 | 0.06 | 0.05 | 2.22 | 1.03 | SPARKS-K | | LETGCPHLLEIHFLLTSARDF--------QEQVV--VMAKEATEDAQRTVMKLFSRLSGIISKFDKLLDGLTYDIVAIRLFKIYDLEEREDLRIEAIRNIIKKKEIEIEKSSIKKLPNSKNT----------------ARLQDETPKVIEYPTNKGLYQEIMSGTISTRTAPRGYKHFLING--INNSISEMFGEMREKYVGDQ---KFDVLDNMDWIFNELIIVKEHIANCCP-PHWN |
4 | 5v7pA2 | 0.14 | 0.07 | 2.44 | 0.51 | FFAS-3D | | NHSPQYTIAAIGLCVCILGEVLRKTAILTAGSNFNHLVQCEKSSDHVLVTHG---VYAWFRHPSYVGWFYWSIGTQIIIPAYTLASWMFFKERIYIEESMLLSFF--------------GQQYC--DYQQQV------------GTGIPFIEGYK------------------------------------------------------------------------------------ |
5 | 5ktfA | 0.16 | 0.03 | 1.11 | 0.53 | HHpred | | --------------------------------------------EQSGAM---GGKPLSPQVLHYAQYVLLGLGGLLLLVPIICQLRSQEKCFLFWS---------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6etxG | 0.14 | 0.14 | 4.73 | 0.93 | MUSTER | | ISKFIYRHGQIRVFNHSRDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDGGSLAAKQCLLNGAPELAADFPEPAGGLWSIRPQNGWSFIRIPGKESLITD |
7 | 5gpjA | 0.18 | 0.05 | 1.50 | 0.89 | CNFpred | | RSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGG---------------------------FEAITGYGLGGSSMALFGRVGGGIYTK------------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 2kluA | 0.15 | 0.04 | 1.40 | 0.51 | HHsearch-2 | | -----------------------------------------------------------GPLVPRGSMALIVLGGVLLLIGLFFSVR-SRHRRRQA-ERMS------QI----KRLLSEKKTSQSPHRFQKTHSP---I---------------------------------------------------------------------------------------------------- |
9 | 3jc8Na | 0.12 | 0.09 | 3.27 | 1.17 | Neff-PPAS | | -----------------------------------------------PVRAVKKREMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRASATPKSHDEVAEFRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLTSDATIEEFPEAQVSPF----FKNIDLQTAKQVGGAQVGVPILVEKITMTSNY- |
10 | 5ktfA | 0.20 | 0.05 | 1.74 | 0.60 | HHsearch | | GSK-------------IEPVVLPLLWFEQS-GAMG-----------------GKPLSTFYQVLHYAQYVLLGLGGLLLLVPIICQLRSQEKCFLFWS---------------------------------------------------------------------------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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