Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | PANEKNGNYYKDIKQYVFTTQNPNGTESEISVRATTDLNFALKNDKTVNATTYEKSTIEEETTTSEPSHKNIQRSTPNVPAFWTMLAKAINGTAVVMDDKDQLFHPIPESDVNATQGENQPDLEDLKIKIMLGISLMTLLLFVVLLAFCSATLYKLRHLSYKSCESQYSVNPELATMSYFHPSEGVSDTSFSKSAESS |
1 | 6djyA | 0.18 | 0.17 | 5.45 | 0.80 | SPARKS-K | | AINEQE----NELTHYVFTTPLSMPTLGYVPLNATSDNQLAMAHFPDTTITQAYNLTNSIKPGDTSLPDAEVARQPPMDNVMYWACQFLSSGTSFLPLERDVVFSGFKGSH-----ICMFSNLRQMNLSPILCPYYDLITLKSLLTYLCLCTIVGLCDTTRNMDTGEYVWKVRDV-VSRNHPAQNVEKFCYTIQNAKY |
2 | 4od4A2 | 0.10 | 0.05 | 1.67 | 0.66 | FFAS-3D | | --------------------------------------------------------------------------------SLWVAGFDTIYSIMDIDFDRSHGLGSIPAL---------LGPKGALAASLAMHAAAVALFITVSTALTALVIILVQAMAWLGRVKESFNLNLAVPII--------------------- |
3 | 1vt4I | 0.18 | 0.15 | 4.94 | 0.43 | HHpred | | ----ETGYQYKDILS-VFDCKDVQMPKSILSKEEIDHSKDAVSLFWLLSK--------QEEM-----VQK---FVEEVLRINYKFLMSPIKTEQPYIEQRDRLYNDNQ--VFAKYNVSRLQKLRQALLELRLGKTWVALDVCLSYKVTVLEMLQKLLYQIDPNWTSIHSIQAELRRLLKSKPYENCLLVLL------- |
4 | 4d8mA1 | 0.15 | 0.13 | 4.40 | 0.69 | MUSTER | | ----KDQQLFNAIMDAV----DNKFLSYNLS-TLNKTIE-NLGLFQAIQVAICQGSTPERFDQNCTPCNPN-----QPCKDDLDRVASRFDTA------NSQFTQHLPEFKNPWSDENSTQEFKRTSVELTLPMYTTVATLHLLLYEGYIEFMTKWN-FHNEQYLNNLK--VELQQLSY---SETVRTS-FLQFLPT- |
5 | 5yhjA | 0.06 | 0.03 | 1.08 | 0.60 | CNFpred | | -------------------------------------------------------------------------------SSAEVWIRQMVKEVRRLLPNEHTALYEFSWHRDE-----SGELLPEEVVAVEVLNILRPTVAISVYVLFTVLALHQFPDVKEQ------------------------------------ |
6 | 2pffB | 0.21 | 0.18 | 5.79 | 1.00 | HHsearch-2 | | TEFENCYLEGNDIHALAAKLLQENDT----------TLVKTIKNYI--TARMAKRPFDKKLAVYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQILEWLENTPDKDYLLSI-----------PISCPLIGVIQLAHYVVTA-KLLVLIGVRCYEAYSLPPSILEDSEGVPSPMISNLTQEQVVEIS |
7 | 4dtdA2 | 0.17 | 0.16 | 5.14 | 0.77 | Neff-PPAS | | ---TKATPDFP-------THFPKSSIGATVGVAAKGGTSATPELRLLESAPWYQKSLKSQFASLTSAENLDDKELAANVFAYLTSIYLKTAELAKKFG------IYINEWDPSEQITPNANGLTDPKVKNAWEILPRT--KPSKIVEILSKSDAKAVKHIKPQLQSRYSESLSKNVFQYFQDGGEVAGHGINNATVGD |
8 | 2lzlA | 0.26 | 0.06 | 1.72 | 0.38 | HHsearch | | ------------------------------------------------------LP-AEEE-----------------------------------LVE-----ADEA-------GSVY------------AGILSYGVGFFLFILVVAAVTLCRLR----------------------------------------- |
9 | 6fmlG | 0.06 | 0.06 | 2.46 | 0.60 | SP3 | | IENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHMQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMF-------HPAMRKALFGPTPSEIKEASFGPRPVTLYPPRALLPAPDHDKQRFTNITVPSMARFVTDS |
10 | 3ikmA2 | 0.10 | 0.09 | 3.34 | 0.82 | PROSPECTOR2 | | GERYKDLQEFKQKK-----AKKVKKEPAT------------------ASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARACLQKLKKLCPRLDDPAWTPGPVPGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHCLEQGKQQLMPQEAAAVPGQPLALTARGGPKDTQPSYHHGNGPYNDVDIPGQAGPG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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