>PF15334 (324 residues) QTHLIKSSTKMLTLFPGERKANISFTQRSRPPAGTRQTSIASFFTLQPGKTNGGDQRSVS SHIESQTNKESKEDATQLDHLIQGLGDDCMAPPLATSTPADIQEARLSPQSFQASYHHGI GSPCVTVLSLFQPDTFVCAGESKASLACSFTQDLESSCLLDQKEEEDSSWKREWPYGSKK KNYQNVERHSKTPGHKGHQLLDKTNLEKVSAKRNRQAPILLQTYQDSWSGANKEAVKQSP CPIPVFSWDSEKNDKDSWSQLFTQDSQGQRVIAHNSRAPFRDVTNDRNQGLGQLPNSPWA QCQARTTQLNLQTDLLFTQDSEGN |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | QTHLIKSSTKMLTLFPGERKANISFTQRSRPPAGTRQTSIASFFTLQPGKTNGGDQRSVSSHIESQTNKESKEDATQLDHLIQGLGDDCMAPPLATSTPADIQEARLSPQSFQASYHHGIGSPCVTVLSLFQPDTFVCAGESKASLACSFTQDLESSCLLDQKEEEDSSWKREWPYGSKKKNYQNVERHSKTPGHKGHQLLDKTNLEKVSAKRNRQAPILLQTYQDSWSGANKEAVKQSPCPIPVFSWDSEKNDKDSWSQLFTQDSQGQRVIAHNSRAPFRDVTNDRNQGLGQLPNSPWAQCQARTTQLNLQTDLLFTQDSEGN | |||||||||||||||||||
1 | 6f1tg | 0.10 | 0.10 | 3.53 | 1.19 | SPARKS-K | EQINIKLSLN-RQFFDERWSKHRVVSCLDWSSQYPE--LLVASYNNNEDAPHEPDGVNMKYKKTTPEYVFHCQSAVMSATFAKFHPNLVVGGTYSGQIVLDNRSNKRTPVQRTPLSAAAHTHPVYCVNVV---------GTQNAHNLISISTD-GKICSWSLDMLSHPQDS---MELVHKQSKAVAVTSMSFPVGDVNNFVVGSEEGSVYTACRHGSKAGIEMFEGHQGPAAVGAVDFSHLFVTVKLWSTKNNAGYVYDVMWSPTHPALFACVDGMGRDLWNLNNDTEVPTASISVEGNPALN--RVRWTHSGREIAVGDSEGQ | |||||||||||||
2 | 2tmaA | 0.06 | 0.05 | 2.29 | 2.39 | Neff-PPAS | --AIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQ-------LEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDK---------LKEAETR--------AEFAERSVTKLEKSIDDLEDELYAQKLKYKAI--------SEELDHALNDMTSI-------- | |||||||||||||
3 | 2nbiA1 | 0.12 | 0.11 | 4.07 | 1.49 | PROSPECTOR2 | QPSDLNPSSSRPPSCLSFGRPDCDVLPTPQNINATECRPDNPMFTPSPDGSPPICSPTMLPTNQPTPPEPSSAPSDCGEVIEECPLDTCFLPTSDPARPPDCTAVGRPPNNLGCPACCPFECSPDNPMFTPSPDG---SPPNCSPTMLPTPQPSTPTVITSPAPSSQPSQCAEVIEQCPIDECFLPYGDSSRPLDCTDPAVNRPDCDVLPTPQNINCPAMFTPSPDGSPPICSPTMMPSPEPSSQPSDCGEVIEECPIDACFLPKSDSARNIGCPSCCPFECSPDNPMFTPSPDGSPPNCSPTMLPSPSPSAVTVPLTSSAPTR | |||||||||||||
4 | 5jcss | 0.05 | 0.05 | 2.11 | 1.06 | SPARKS-K | RVDVFSSDIDSMDILGGYEQVDLTRQISYITEELTNIVREIISMNMKLSPNATAIMEGLNLLNIVTPEKFQDFRNRFNRFFSHLEGHPLLKTMSMNIEKMTEIITKEASKAVEKCSQEDGQPRVLKPHPNFRLFLTMDPKYGELSIYIDELHSRSTAFDRLTLGFELGENIDFVSIDDGIKKIKLNEPDMSIPLKHYVPLSRPCIFAQVHILLLSDEEPIEESLAAVIPISHLGEVGK----WANNVLNCTEYSEKKIAE--------------------RLYVFITFLTDMGVLEKINNLYK--------------------- | |||||||||||||
5 | 3c5bA | 0.10 | 0.08 | 2.98 | 0.45 | FFAS-3D | -VEQLAKTNDILTDAINDGSKHKTTIRAGIPEPVWRR--------YNQGVQPTKTQTVPVTDTTGMLYDLGFVDVSENMGKLQGFNNKVARYSIYGNTDAEPEAMGLAPRFNTLSTSKAASAENVFSAGGSGSTSIWFMSWGENTAHMIYPEGMVAGFQHEDLGDDDGNGGQKWDIGLSVRDWRSISRTLTKDASTGADLISMDAYYARDVAMLGDGKEVIYANKTIHAWLHKQAMNAKNVNLT------------------IEEYGGKKIVSFLG-IPIDAILNTESAVTA-------------------------------- | |||||||||||||
6 | 2pffB | 0.20 | 0.10 | 3.27 | 0.41 | HHpred | EISLVNGAKNLVVSGPTLRKAKAPSDQSRIPFSERKLKF------------SNRFLPVASPFHS-------HLLVPASDLINKDLV-----KNNVSFNAKDIQIPVYD----------TFDGSDLRVLSGSISERIV-------------------DCIIRLPV------KWETTTQFKA-----------------THILDFGPG------GASGLGV--LTHRN-------------------------------------KDGTGVRVIVAGTL----DINPDDDYGFKQ------------------------------- | |||||||||||||
7 | 1zvoC | 0.11 | 0.10 | 3.81 | 0.98 | MUSTER | PGKGLEWIGGVYYTGSIYYNPSLRVTISVDTSRNQFSLNLRSARGNPPPYYDIGTGSDDGIDVWGQGTSSAPTKAPDVFPIISGCRHACLITG-YHPTSVTVQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWREYKCASKS-KKEIFRWPESPKAQASSVPTAQPQAEGSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLLLTPAVQDLWLRDKATFVVGSDLKDAHLTWAGKVPTGGVEEGLLERHSNGSQSQ--HSRLTLPRSLWNNHPSLPPQRLMALREPAQAPVKLSLN---LLASSDPPE | |||||||||||||
8 | 5lzt1 | 0.33 | 0.02 | 0.46 | 0.51 | HHsearch-2 | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMWRFYTEDSPGLKV----------------------------------------------------- | |||||||||||||
9 | 2bsgA | 0.09 | 0.09 | 3.40 | 2.38 | Neff-PPAS | --DIVLNDLPFVDGPPAEGQSRISWIKTQYGSEGSMNRPTVSVLRNVEVLDKNIGILKTSLETANSDIKTIQINKKDISDLKTLTSEHTEILNGTNNTVDSILADIIRNDLLWIKRKHRIINNTDVITSQGIREVGNLREELVYSRLNEIDTKQTTVESDISAIKTSISIITS--VNTNTDNIASINLEIKQRLTVIETSIIKGQIKDNTTSILRANVSWLNQIVSLLNRVSTIETSVSGLNNAVQNLQVEIGNNALNTLVNGTNPNGSTVEERGLTNSIKANETNIASVTQEVNTAKGNISSLQGDVQALQEAGYIPEAPRDG | |||||||||||||
10 | 5lzt1 | 0.33 | 0.02 | 0.46 | 0.29 | HHsearch | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GMWRFYTEDSPGLKV----------------------------------------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |