Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | QPVSKVIERNRLRTVLKNLSLLKLLKSSNRRIQELHKLAKRCWHSLLSVPKILRISSGENSACNKAKQNNEEFQEIGCSEKELKSKKLESTGDPKKKEYKEWKPQVQSGMRNKAKTSLAAMPQKEKHIEPEVPKTSRDDSLNPGAQGRQPLTEGPRVIFIKPYHNRIPMGHMKQLDIADQWIWFEGLPTRIHLPAPRVMCRSSTLRWVKRRCTRFCSASL |
1 | 6etxG | 0.12 | 0.12 | 4.31 | 1.02 | MUSTER | | SPFAPDYIQRSLFHRKGCFSFLRFIDISNLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGSFIRIPGKES |
2 | 2tmaA | 0.08 | 0.08 | 3.06 | 1.16 | Neff-PPAS | | --RSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGK---CAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLE |
3 | 3jc8Na | 0.07 | 0.06 | 2.65 | 0.80 | SPARKS-K | | LPVRAVKKREMGRQVLVLFAVVLIGAGVYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGRSGPVRMMDATPKKVWVKTFSENNNASAVSHDEVAEFMRGLNGVVWTPKGMGRLVDRRRDSKTARVEMLT-----SDATIEEFPEAQVSPFFKNIDLQTAKQVGGAQVGVPILVEFKITMTSNY---------- |
4 | 1yd8G | 0.18 | 0.06 | 1.93 | 0.59 | FFAS-3D | | QKVTKR--LHTLEEVNNNVRLLEMLLHYSGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRV------------------------------------------------------------------------------------------------------------------------------------------------ |
5 | 3m1iC5 | 0.21 | 0.04 | 1.30 | 0.29 | HHpred | | ------AHWNFLRTVILKL--FEFMHETHEGVQDMIKIVQKCKYHFVIQQP------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 6d4hA1 | 0.09 | 0.09 | 3.29 | 0.90 | MUSTER | | EEGANVLTTEALLQHLDSALQASRVHVYMY--NRQWKLEHLCYKS-------GELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTSTGKLVSAHALLMTPKQMYEHFKGYEYVSHINW |
7 | 2fgeA | 0.12 | 0.04 | 1.30 | 0.49 | CNFpred | | -------IAGWMSEQMGGLSYLEFLHTLEKDWEGISSSLEEIRRSLLARNGCIVNMTADGKSLTNVEKSVAKFLDL------------------------------------------------------------------------------------------------------------------------------------------------ |
8 | 4oxpA2 | 0.19 | 0.05 | 1.61 | 0.35 | HHsearch-2 | | RKITAVTDRKRLKSVVQSLDVPQGAKTKAEIKRDYEYLLRL-WENIREAPALIYEE--ED---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
9 | 6aayA1 | 0.10 | 0.10 | 3.70 | 1.01 | Neff-PPAS | | ENISLVEYERYVKLLSDYFPARLLDKPIKERKENFKKNFKGIIKAVRDLHGEVEITDEIFGVLDELKSTVLTVKKKKVKTDKTKEILKKSIEKQLDILCQKKLEYLRDTARKIEEKRRNQRERGEKELVAPFKYSDKRDDLIAADKKKDSLKESSKAKYNTKSDPQQEEGDLKIPISKNGVVFLLSLVSEATVSHGKNSICFATHEIFSHLAYKKLKRKV |
10 | 3td7A2 | 0.18 | 0.10 | 3.11 | 0.54 | HHsearch | | TPL-----------DHKAFSFKKLYYMSLDKVENFVRIARMR-----------GIS-----------DKYFAFLELA----------------------------------TVLNGDF------------NELKK--------------QSSWEYRNKYAQKK-----IRHMRENA--IPSGYWKGTPTIDELK--LLLFLASNLDAINNVERLESTHY- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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