Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | DFSFIHQTSVLDSSALKTRVQLSKRSRRRAPISHSLRRSRVSESESRSPLEEEANSTWMFKDSTEEKSPRKEESDEEEKTPRAERTPISRPQRMPVFPGMDPAALKAQLHKRPEMDSPSDTPSWAPQPKTPKSPFQPGVLGSRVLPPSVEKDERSEEPSPQWLKELKSKK |
1 | 4nl6A | 0.12 | 0.11 | 3.78 | 1.12 | SPARKS-K | | TTPKRKPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGNREEQNLSDLLSPICEVANNIEQNAQENENESQ--------------VSTDESENSRSPGNKSDNIKNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSC |
2 | 4k0mC | 0.07 | 0.06 | 2.68 | 1.03 | MUSTER | | DQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------- |
3 | 4k0mC | 0.04 | 0.04 | 2.04 | 1.75 | Neff-PPAS | | NVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA------------- |
4 | 1mv3A | 0.13 | 0.12 | 4.05 | 1.07 | PROSPECTOR2 | | DGSPAATPE-------------IRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGT--------QPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPDWNKKLEKCR |
5 | 6ahfC1 | 0.08 | 0.06 | 2.32 | 1.06 | SPARKS-K | | QHPQLQPIHIL-AAFIESVPYLQNLIEKGRYDYDLFKKVVNRNLVRIPQQQPAPAEI----TPSYALGKVLQDAAKIQKQQKDSFFNDSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLE---------------------------------------- |
6 | 4bmlA | 0.12 | 0.11 | 3.71 | 0.51 | FFAS-3D | | -----SQYSTRAEVSKQIGEALATH------YDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAIVDGFFEAAAVLDERSAPQEGRVAV---LSPRQYYSLISSVDTNILNREGNSQGDMNSGKGLYSIAGIRKSNNLAGLYGQDLSSAAVT----------- |
7 | 1wglA | 0.15 | 0.03 | 0.99 | 0.29 | HHpred | | --------------------------------------------------------------------------------------SGCSEEDQDMFPNMDQEVIRSVLEAQRGNKDAAI-------------------------------------------------- |
8 | 1jvrA | 0.11 | 0.08 | 2.95 | 0.98 | MUSTER | | ----------------------------------HMGQIHGLSPTPIPKAPRGLSTHWLFLQAAYRLQPGPSDFDKTPIWLNPIDYSLLASLIPKGYPGRVVEIINILVKNQV-SPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF------------ |
9 | 2wawA | 0.10 | 0.03 | 1.08 | 0.53 | CNFpred | | -----------------------------------------------------------------------------------------------DQPGITASAVASLIAGGR---------------------------ATIAVCEYANGIGHPFWVSRGVFGDLAELH |
10 | 1wglA | 0.17 | 0.05 | 1.75 | 0.39 | HHsearch-2 | | -------------------------------------------------------------------------------GSS-GSSGCSLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSQMGEEPSGPS----SG-------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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