>PF15322 (309 residues) AQGLTSTGMQRVSFRFGGPMTRSYRTTARTGAPRKMRVTVEDEDDLVAEADHLAGPAAAE LLASTVYTGISQSRLSQEEDGSLEEGVVIDAGKSNTRSGIPSMDSTTRGSSSRFTANSQE PEIRLTSSPPPSTWRSSMDLPPSGSTLNQWSTAGATPNAWPPPSATAMPPPEDLRVVLMP WGPWHCHCKSGTMSRTRAGKLHGLSGRLRVGALSQLRTEHRPCTYQQCPCNRHREECPLD SGLCPDTSCTTQTTTTTTASMPPLSARLRPTPFPMSSPSPALDFWKRVRMGLEDIWNSLS SVFTEMQPI |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | AQGLTSTGMQRVSFRFGGPMTRSYRTTARTGAPRKMRVTVEDEDDLVAEADHLAGPAAAELLASTVYTGISQSRLSQEEDGSLEEGVVIDAGKSNTRSGIPSMDSTTRGSSSRFTANSQEPEIRLTSSPPPSTWRSSMDLPPSGSTLNQWSTAGATPNAWPPPSATAMPPPEDLRVVLMPWGPWHCHCKSGTMSRTRAGKLHGLSGRLRVGALSQLRTEHRPCTYQQCPCNRHREECPLDSGLCPDTSCTTQTTTTTTASMPPLSARLRPTPFPMSSPSPALDFWKRVRMGLEDIWNSLSSVFTEMQPI | |||||||||||||||||||
1 | 3cnfT | 0.07 | 0.06 | 2.70 | 1.37 | Neff-PPAS | PKPNQIRTITSHTLRLLGPFQYFNFSETDRGHPLFRLPLKYPSKAIPADELIDN---LHSWMRSVHLLHVRSEDNTLRYNWMLGVYARSTNYTTPVGQLVVNAPANPQDAFNSVFVALGIDYIDIPITNSNIFDDSSTPYNVRIWHAPTMTEVNHILALMRKSTLVSTHS------------SWHWDVLHTFHYRSESDMIDHFAAKILEDWRQKEKLDKGALVEADRVVQRLIPLSSSTYVQRNDQLRRLYRRMYNDSRTLYMTQRHQELLLAQITADPNILLYPYTYIFTTAYTSMNYISNTGQGRI | |||||||||||||
2 | 4uxeA | 0.10 | 0.10 | 3.56 | 1.29 | PROSPECTOR2 | AQTVNGSLTLTQQTNLSAPLVSSSTGEFGGSLAANRTFTIRNTG-------------------APTSIVFEKGPASGANPAQSSIRVWGNQFGGGSDTTRSTVFEVGDDTSHHFYSQRNKDGNIAFNINGTVPININASGLNVNGTATFGRSVTANGEFISKSANAFRAINGDYGFFIRNDASNTYFLLTAAGDQTGGFNGLRPSGGLTVNSRIRSQGTKTSDLYTRAPTSDTVKTNEVTGLPYLERGEEVKSPGTLTQFGNTLDSLYQDWITYPTTPEARTTRWTRTWQKTKNSWSSFVQVFDGGNPV | |||||||||||||
3 | 4btgA | 0.14 | 0.13 | 4.45 | 0.91 | SPARKS-K | LRTLAPSEHELFHHHVLSPLGFILPDAAYVYRVGRT-ATYPNFYDCVRASDLLSAPAISQHLANAATTAFERSRGNFDANAVVSSGRLWSPSTPKELDP-SARLRNTNGQRGRAEVIFSDEEL--SSTIIPWFIEAMSEVSPKLRPINETTSYIGQTSAIDH-----MGQPSHVVV----YEDWQ-FAKEITAFTPVKLANNSNQRFLEPGISDRMSATLAPIG-NTFAVSAFVKNRTAVYEAVSQRGTVNSNGAEMTLGFPSVVERDYALDRDPMVAIAALRTSNDLKRSMFNYYAAVMHYAVAHNPE | |||||||||||||
4 | 5x4zC | 0.10 | 0.08 | 3.00 | 0.47 | FFAS-3D | --------------------SKEPKVNIINAQDDEVELMLSDVNLSLANSLR------RTMLAEVPTLAIDLVEIKMNTSVLADEFIS--HRLGLIPLVSEDVEEMKYSRDCTCEDYCDECSVVLELSA-----RHEGETTDVYSSSLIKVSGPGNLNVGEPVRRDDYDQ--GILLCKL-----------------RNHQELNIRCIAKKG-IAKEHAKWSPCSFEYDPHNKLKHTDVDAKKEWPDSKYATWEEPPKPGEVFDYKAKPNRETTGSLKANQVFSRGIKT---LQEKLANVLFELENSRPA | |||||||||||||
5 | 5ij7A | 0.17 | 0.12 | 4.04 | 0.43 | HHpred | -------MTRECSVTSDFPKQVIVPMYSWSPLQQN--FMVEDDEIFVELVNALGQPKIFEAISSMFPDKGTAEEL----KEKYKE-----CTPNIDGPNAKSVQREQLHSHTLFCRRCFKYDCFLHPHATPN-----------------------TYKRWSGAEATYYDNFCAIARLIYPCDN-SCPCIAQNFSSECQNRFPGCRCK---A----------QCNTKQCPCYLAVREC--DPDLCLTCGAADHWDSNVSKNC-SIQRG----------------SKKHLLLAPSDVA------------- | |||||||||||||
6 | 2atyA | 0.12 | 0.12 | 4.12 | 0.87 | MUSTER | LNGRISYYSTPIAV--GTVIRYSCSGTFRLIGEKSLLCITKDKVDGT----KPAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGVTFACKTNFSMNGNKSVWNNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITL-TPKVTVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFN-STFRSVSELPIMHQDWLNGKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMTDFFPEDITVWNTQPIMNTNESYFVYSKLN-VQKS | |||||||||||||
7 | 4okrA2 | 0.21 | 0.04 | 1.23 | 0.55 | HHsearch-2 | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------QDAICSDWSAWS-PC--GSQIRTRTEVSAPQGTPTCPDC---PAPMGRTCVEQGGL--EEIREC------------------------------------------------------------------------ | |||||||||||||
8 | 2tmaA | 0.08 | 0.08 | 3.01 | 1.33 | Neff-PPAS | --DAIKKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAAD-ESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIE-------------SDLERAEERAELSEGKCAELEE-EIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAEFAERSVTKLEKSIDDLEDE------LYAQKLKYKAISE---ELDHALNDMTSI | |||||||||||||
9 | 1vexA | 0.26 | 0.05 | 1.39 | 0.42 | HHsearch | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSIPCLLSPWSEWSCTCGKGMRTRQRMLKSLA-ELGDCNEDL----EQAEKCMLPECP-------------------------------------------------------------------------------- | |||||||||||||
10 | 5n8oA | 0.11 | 0.11 | 3.96 | 0.68 | SP3 | SGQRTGTGSALMAMKDAG--VNTYRWQGGEQRPATIISEPDRNVRYARLAGDFAASVKAGEESVAQVSGVREQAILTQTQGVLHPEVTMTALSPVWLDSRSRYLRDMYRPGMVMEQWNPETRSHDRYVIDRVTAQSHSLTLRDAQGETQVVRISSLDSSWSLFRPEKMPVADGERLRVTGKIP-GLRVSGGQVASVSEDAMTVVPGRAEPASLPVSDSPFTALKWVETPGHSVSDSATVFASVTQMAMNATLNGLARSGRYSSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTP | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |