Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | MGNNSSHKRTKVPKQARKERPPDMDKAGRKQQLFSHLKQKKPSRWVRVNVDDARSREVTLGWAKIVLLFPLDKRQQLAEVAAGPGARPRRPGEDATGAPEGSPAAAAAPMLRGAGDGVDRREGARGREMKKILVLLLLLDARLQEEGRCAAGAPGGGAGAGGGANAEQGWQRLYARLLTESEVDREAKPAEEQPRKRHRCPR |
1 | 3rylA | 0.10 | 0.09 | 3.34 | 0.75 | SPARKS-K | | LSEDLFKQSPKLSEQELDEQAADID---WHQVISEKTRGLTTEEAKSEHRYVQAFCREILKY-------PDSVDVALKRLQTGRERLFTTTDEKGNRELKKGDAILESAINAARAISTEEKNTILSNNVKSATFEVFCQNGKTAFYALRAGFYSAFKNTDTAKQDITKFKDNLQAGFYSYQGLTNRVAQLEAQLAALSA--- |
2 | 2o1uA4 | 0.13 | 0.09 | 3.11 | 0.49 | FFAS-3D | | -------------DESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESP-----CALVASQYNMERIMKAQAYQTGKDISTNYYASQKKTFNPRHPLIKDML-----RRVKEDEDDKTVSDLAVVLF--ETATLRSG--------------YLLPDTKAYGDRIERMLRLS--------------------- |
3 | 6b40A | 0.21 | 0.15 | 4.87 | 0.43 | HHpred | | -------------WAKT--ANVKKQIVDAESKLDKHLKESNPTLMM--AGNYARELFKAEHADKLVALVDKPDRKSLVEVQLRKVYRANWPLNDMSDEVRQYTNEHVQELIELSSEGNEAGKGNTYNGLRDVLCTHWLYSKTLRDGGG-GGGGGGGGGGGGGGGG------------------------------------- |
4 | 4k0mC | 0.18 | 0.16 | 5.17 | 0.85 | MUSTER | | ARTAKFDETVEVHAKLGID-PRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADY----VGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA----------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
5 | 1uaaA | 0.09 | 0.04 | 1.50 | 0.48 | CNFpred | | ---------------------------HEAERVTGELIAHHFVNKTQ--------------YKDYAILYRGNHSRVFEKFLMQNRIPYKIS--------------GGTSFFS-------------RPEIKDLLAYLRVLTNPD----------------------DDSAFLRIVNTP------------------------- |
6 | 1vt4I3 | 0.17 | 0.12 | 4.05 | 0.96 | HHsearch-2 | | --EYALHRSIVIPKTFDDLIPPY-----LDQYFYSHIGHHLKNIEHPE-------------RMTLFRMVFLDFRFLEQKI---------RHDSTAWNASGSILNTLLKFYKPYICDNDPK-------YERLVNAILDFLPKI--EEN----------------LICS-KYTDLL--RIALMAED-E-AIFEEAHKQVQRGGG |
7 | 4ke2A | 0.13 | 0.12 | 4.29 | 1.08 | Neff-PPAS | | --NIDPAARAAAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALETIAAYAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAFAAAP-------- |
8 | 6b40A | 0.21 | 0.16 | 5.20 | 0.78 | HHsearch | | ALEKGTLKDTFGSWAKT--ANVKKQIVDAESKLDKHLKESNPTLMM--AGNYARELFKAEHADKLVALVDKPDRKSLVEVQLRKVYRANWPLNDMSDEVRQYTNEHVQELIELSSEGNEAGKGNTYNGLRDVLCTHWLYSKTLRDGGG-GGGGGGGGGGGGGGGG------------------------------------- |
9 | 6fmlG | 0.08 | 0.08 | 3.27 | 0.61 | SP3 | | LVEYRLPRLIWCDGGRLDKPGPGNLVAGFRSKYLNHMMNIWTRSSLEGIENFTWLRFVDTSLQEAYRASHTDVFARAVDLASKQNRLGHQIVYDEPEDKKWTPVHALFQICERENPKAVAEITTEGVLRDLMNIARVKYRELGLCRLEKAARPRASAPPIEVVCDSRSAVIERENIMFHPAMRKALFGPTPSEIKEASFGPR |
10 | 3ikmA2 | 0.10 | 0.09 | 3.29 | 0.82 | PROSPECTOR2 | | GERDLQEFKQKKAKKVKKEPATASK-----------LPIEGAGAPGDPMDQEDLGPCSEEEEFQQDVMARACLQKLKGTTELLPKRPQHLPGRLDDPAWTPGPSLGRRDNLAKLPTGTTLESAGVVCPYRAIESLYRKHCLEQGKQQLMPQEAAAVPGQ------------PLALTARGGPKDTQPSYHHGNGPYNDVDIPG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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