Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | QPQRLPQPNTSSLEKSEEETGKIQNGHAGLSNGNGIHNGVKHASTDNRKLSAPVSQKMHRKIQSSLSVNSDSSKKSKISSAYSQKPGSSPEDCCVHCILACLFCEFLTLCNIVLGQASCGICTSETCCCCCGDEMGEDCNCPCDMDCGIMDACCESSDCLEICMECCGICFPS |
1 | 5houA | 0.10 | 0.08 | 2.99 | 0.88 | SPARKS-K | | MEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSP---------LPSQAMDDLMLSPDDIEQWFTEDPGPDGSCFNGTATGPTADPEKRKLIQQQLVLLLHAHKCQRREQANVLNHMTHCQACQVAHCASSCTR---HDCPV-----CLPLKNASDKR---------------- |
2 | 2ftcD | 0.11 | 0.09 | 3.31 | 0.49 | FFAS-3D | | TKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRG--GGVAHGPRGPTSYYYMLPMKVRALLKVALTVKLAQDDLHIMDSLELPTGDPQ---------------YLTELAH------YRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSML---------- |
3 | 5gz4A1 | 0.23 | 0.08 | 2.54 | 0.23 | HHpred | | ------------------------------------------------------------------------------------NKCTERKACCWDYQD---------ICVLPTQS--------WSCNKRCGEKRMANVLCSCSEDCLTKKDCCTD--YKSICKR-------- |
4 | 5houA | 0.12 | 0.10 | 3.68 | 0.97 | MUSTER | | ---------GSHMEEPQSDPSVEPPLSQET-----FSDLWKLLPENNVLSPLPSQAMDDLMLSPDDIEQWFTEDPGPDGSCFNGTATGPTAD-RKLIQQQLVLLLHAHKCQRREQANEVRACSLPHCMTHC--QAGKACQVA----CASSRQICTRHDC--VCLPLKNASDKR |
5 | 5figA | 0.25 | 0.11 | 3.40 | 0.69 | CNFpred | | -------------------------------------------------------------------------------------------EACIDCMKACNHCFCIRLDRECAICALAVKAMQEICALCAD--ICEACG----TECGKHDH-DHCQACAKACFTCAEQCRSM |
6 | 5o31s | 0.25 | 0.02 | 0.72 | 0.55 | HHsearch-2 | | SKFRMPQPSSGRESPR------------------------------------------------------------------------------------------------------------------------------------------------------------- |
7 | 5houA | 0.12 | 0.10 | 3.66 | 1.07 | Neff-PPAS | | ----------SHMEEPQSDPSVEPPLSQETFSDLWKLLPENNVLSPLPSQAMDDLMLSPD--DIEQWFTEDPGPDGSCFNGTATGPTADPEKRKLIQQQLVLLLHAHKCQRREQANGEVRACSLPHCC-----QAGKACQ---------VAHCASSRQIISHWKNCCPVCLPL |
8 | 2mop11 | 0.37 | 0.08 | 2.23 | 0.40 | HHsearch | | ------------------------------------------------------------------------------------------------------------------SPPV------------CGNEQGEDCDCGSPANCQ--DRCCNAATCKLTP---------- |
9 | 5ml1A | 0.20 | 0.12 | 3.71 | 0.82 | SP3 | | -------------------------GSMSSVFGAGCTDVCKQTPCGCATSGCNCTDDCKCQSCKYGAGCTDTCKQTPCGCGSG---CNCKEDCCQSCSTAC-------------------KCAAGSCKCGKGCTGPDSCKCDRSCSCK------------------------- |
10 | 4k0mC | 0.07 | 0.06 | 2.58 | 0.93 | PROSPECTOR2 | | KPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----------------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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