Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | EISPASGLISILKKRNMPTDNFSMSASPESRSNKPTTKRRVRFKVADDGFDSDVGGRDSCLLLFLLCLVTVVISMGGTTLYCALGDVHSSVCQDFSRNVDFYFGQVQRAVAQIHQWL |
1 | 4ozvA1 | 0.13 | 0.12 | 4.15 | 0.72 | SPARKS-K | | ------ADLVPPPGYYAAVGERKAGSCPAVPP---PYTGSLVFTSKYEGSDSARAIKDITDMERGATKLVTQYMRSGRDLACAQSDDFNSMRKWALGSLSGAYMRLKFSSREIEDWF |
2 | 5mpbS1 | 0.08 | 0.07 | 2.68 | 0.54 | FFAS-3D | | -------LLKFITSNHKSSVPGSAELRNSYPASFYSVNTE---------KKTIEVTAEINCFMHLLVQLFLWVEFNRKVVIPNLLCYYNLRSLNINAKLWFYIYLSHETLARS---- |
3 | 5jvmA | 0.21 | 0.05 | 1.63 | 0.25 | HHpred | | --------------------------------------------------------------------------------------KKGMLVEDLEKERDFYFGKLRNIELICQE-- |
4 | 6me6A | 0.15 | 0.15 | 4.91 | 0.69 | MUSTER | | KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLC--GVGKDQFEEVECLKPSDLRSFLTMFVVFVIFAICFAPLNCIGLAVAINPQEMAPQIPEGLFVTSYLLAYFNSCL |
5 | 5xtcl | 0.09 | 0.04 | 1.62 | 0.59 | CNFpred | | ----------------------------------------------------------FSMMFIPVALFVTWSIMEFSLWYMNSD----PNINQFFKYLLIFLITMLILVTANNLFQ |
6 | 2pffB | 0.12 | 0.11 | 3.96 | 0.59 | HHsearch-2 | | -MDAYSTRPLTLSHGS-LEHVLLVPTASFFIASQLQEQFNKILPEPTEGFAADDEP-TTPAELVGKFLG--YVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQEN |
7 | 3nrgA2 | 0.07 | 0.07 | 2.80 | 0.91 | Neff-PPAS | | -----DVGIQFQFHNPRLAQIAYKALYDDVPLPAETQVIRHGSFAYEQGIADGSLVPDLDADTAAFVLNVVFTELGNHLIERFAVNPAELLREGGIVLLQPARRVIEQVIDILERGR |
8 | 4uzyA2 | 0.21 | 0.19 | 5.99 | 0.67 | HHsearch | | HYKEAIRYEPVVKKNADNLLGVTAIVSYIMTSQNEEAEELMRKVEKEEERSSMQDPDKP---CFHLCIINLVI---GT-LYCAKGNYESRIIKSLE-ETDTWYY-AKRCFLALIEM- |
9 | 1sr2A | 0.07 | 0.07 | 2.79 | 0.69 | SP3 | | ---MQEAVLQLIEVQLAQEEVTESPLGGDENAQLHASGYYALFVDPDKRLYTEAATSDAALAQTAHRLKGVFAMLNLVPGKQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL--- |
10 | 1texA | 0.07 | 0.07 | 2.85 | 0.51 | PROSPECTOR2 | | QYLPNTSMSPQPREWFADEDQSILRLLDPLIEGKPDLAPATIWRTPNGVWDLPDRSGSGLLSAIRDVVVSQAVSFWRAVQTRVWRRAEYGAIAHVITMLRAQEEGWRAWFTEENVEP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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