Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MQENDLFKAEFILITDSGDEDEAAAASINIQRPSNGYGPPKPLSPPSLYGSSSTICSVNEPCTQISSRGYLAKSQAPQRYRGQQYKIKTSYKAFAAIPTNTLLMEQKALEEPTKTASVIEGTALDTHSEMCSPAQLRQQTEELCAVIDQVLQDPLTMMNTESDGGKVGPLNMDSSETDKVSSTLQRAAGRETRYANLYKSTPMVAESQMTKPGVIRPVLVKAKSAQQKEEPYQPNPFKKYLEEISDQDIEQ |
1 | 2blmA | 0.10 | 0.09 | 3.39 | 1.06 | SPARKS-K | | LEEQFDAKLGIFALDTGTNR---------TVAYRPDERFAFASTIKALTVGVLLQKSIEDLNQRITYTRDDLVNPITEKHVDTGMTLKELADASLRYSDNNLILKQESLKKELRKIGDEVTNPERFEPELNEVNPGETQARALVTSLRAFALEDKLPSEKRNTTGDALIRAGVPDGWEVADKTGAASYGTRNDIAIIWPPKGD------------PVVLAVLSSRDKKDAKYDDKLIAEATKVVMKALNMN |
2 | 2tmaA | 0.07 | 0.07 | 2.79 | 1.44 | Neff-PPAS | | --KLDKENAL------DRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETR-AEFAERSVTKLEKSI |
3 | 5gaoE | 0.09 | 0.09 | 3.34 | 1.07 | PROSPECTOR2 | | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-------AAAAAAAAAAAAAATTKEAYKKLSQKFSNKK |
4 | 5yfpB | 0.07 | 0.07 | 2.76 | 1.01 | SPARKS-K | | CDQFIEFWEHIEKFLDGTYQNSIINEKRKENILIGDIESYQKSLILKEEQINQNLISFTSSQSSLPSSLKDSTGDITRSNKDSGSPLDYGFIPPNCNGLSCLRYLPKIVEPKFSTELAQLNITTNGITICRNLSTIINRCVGAISSTKLRDISNFYQLENWQVYETVTFSSKSQDSS-----KNLTFEYGVTQFPEIVTSEVSIKTTRLFA-----------YEKLPIINGISVVPSKQLLTGIEIQQIIS |
5 | 4bmlA | 0.12 | 0.09 | 3.22 | 0.48 | FFAS-3D | | ----KLFSGE---VFTAFNNASIFKGLVRSYDLRGG-KSKQFMFTGKLSAGYHTPGTPIVGDAGIKANEK------------------------------TLVMDDLLVSSQFVYSLDEIFSQYST-----RAEVSKQIGEALATHYDERIARVLAKASAEASPVTGEPGGFHVNIGAGNTNDAQAI------VDGFFEAAAVLDERSAPQEGVLSP-RQYYSLISSVDTNILNREI-------------- |
6 | 2pffA1 | 0.16 | 0.13 | 4.37 | 0.45 | HHpred | | --KYVLITAKVVVTTSRFS-KQVTDY---YQSIYAKYGAKGSTLIPFNQGSKQDVEAYDTEKNGGLDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMG-----------------------CVKKQKS-------A--RGIETRPAQVILPMSPNHGTFGGDGMYSESLSLETLFNRWANQLTVCGAIIGWT---RGTGLMSANNIIKMGVRTFGTPEVVELCQKSPLRKELVETSEVR--- |
7 | 4nl6A | 0.11 | 0.11 | 3.84 | 0.89 | MUSTER | | MSSGGSGGG-------PEQEDSVLFRRGTGQSDDSDIW-ASFKHALKNGDICETSGKPKTTPKR-KPAKKNKSQKKNTAASLQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVEQNLSDLLSPICEVANNIEQNAQENEN-----ESQVSTDESENSRSPGNKSDNIKPKSAPWNSFLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPPPHLLSCWLPPFPSGPPIIP-PICPDSLDDADALGSM |
8 | 1moqA | 0.23 | 0.05 | 1.62 | 0.48 | CNFpred | | -----------------------------------------------------------------------------------------STKAFTTQLTVLLMLVAKLSRLKGLDASI--------------EHDIVHGLQALPSRIEQMLSQDKRIEA-------------------------------------------------------------------------------------------- |
9 | 2pffB | 0.17 | 0.15 | 4.85 | 0.86 | HHsearch-2 | | QEQFNKILP----------------------EPTEGFAPTTPAELVFLG----YVSSLVEPSKVGQFENCYLEHATARIMAKRPFDKKSNSALFRAVGEGNLDAEKLNILEWLENP--SNTPDKDYLLSICGVIQLAH--YVVTAKLPGELRSYLKGATGHSQG--LVTAAIAETDSWESFFVSVRKAITVEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVTIPFSKLKFSNRFFHSHL |
10 | 4ke2A | 0.14 | 0.10 | 3.53 | 1.40 | Neff-PPAS | | -----------------DPAARAAAAAAASKAAVTAADAAAAAATIAASAASVAAATAADDAAASIATINAASAAAKSIAAAAAMAAKDTAAAAASAAAAAVASAAKALEAAATTANTAAAAAAATATTAAAAAAAKATIDNAAAAKAAAVATAVSDAAATAATAAAVAAATLEAAAAKAAATAVSAAAAAAAAAIAFAAAP------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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