Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180
| | | | | | | | | |
| Seq | DHTDEYLQLLDKLDKNSKMIDSLNREVQNKKQQTKLQESNYKNKYMQTRNELINELRHSKKLYDNYYKLFQKYQQLKIISKESLELQNRIPTLDDRLVNETLVKDRKINELQKRIQSLQIANENLTTQREIDILKYESRIKELEAKLILQNDVHSQFHHSTSTYNNNNEFLNTDYDIDTLDTSFSRHL |
1 | 6ewyA | 0.11 | 0.09 | 3.09 | 1.35 | FFAS-3D | | PQTDTIAALIADVAKANQRLQDLSDEVQAEQESVNKAMVDVETARDNAAAVSQRAVKDANAAIAAAQHIIATVTAAKTLSASSQAVMANLQRARTERVNTESAARLAKQKADKAAADAKASQDAAVAALREEVQRLAAERDAAQARLQA--------------------------------------- |
2 | 5nnvA | 0.09 | 0.09 | 3.29 | 1.07 | MUSTER | | EEELAESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLSKQEAVFETLQAEVKQLRAQVKEKQQ-LSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNELIALR |
3 | 5nnvA | 0.15 | 0.14 | 4.87 | 1.32 | Neff-PPAS | | QVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLRAQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTS--ESSSTSGEEKLEEAAKHKLNDKTKTIELIALRRDQRIKLQHGLDTYERELKEKRLY |
4 | 5nnvA | 0.11 | 0.11 | 3.87 | 1.02 | PROSPECTOR2 | | AESSAISAKEAKIEDTRDKIQALDESVDELQQVLLVTSEELEKLEGRKEVLKERKKNAVQNQEQLEEAIVQFQQKETVLKEELSKQEAVFETLQAEVKQLR-AQVKEKQQLSNELTELKIAAAKKEQACKGEEDNLARLKKELTETELALKEAKEDLSFLTSESSSTSGEEKLEEAAKHKLNDKTKLL |
5 | 6egcA | 0.17 | 0.13 | 4.20 | 0.97 | SPARKS-K | | TRTEIIRELERSLREQEELAKRLKELLRELERLQREGSSD---------EDVRELLREIKELVEEIEKLAREQKYLVEELKRQG---NEIIRELERSLREQEELAKRLKELLRELERLQREVRELLREIKELVEEIEKLAREQKYLVEELKRQ----------------------------------- |
6 | 2tmaA1 | 0.13 | 0.10 | 3.50 | 1.32 | FFAS-3D | | --KKKMQMLKLDKENALDRAEQAEADKKAAEDRSKQLEDELVSLQKKLKG-TEDELDKYSALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKV-IESRAQKDEEKMEIQEIQLKE--------------------------------------- |
7 | 3na7A | 0.11 | 0.10 | 3.65 | 0.28 | HHpred | | ---IEISHLDKEIDSLEPLIREKRKDLDKALNDKEAK----NKAILNLEEELKLQVSKNEQTLQDTNAKIASIQKKMSENIEEDIAKERSNQANREIENL----QNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEPKAKNTSTIKKQAC----GGCFIRLNDKIYTEV |
8 | 4cgkA | 0.11 | 0.11 | 4.02 | 1.05 | MUSTER | | NLQAENDRLQAESKKLEGEITELSKNIVSRNQSLEKQARSAQTAVTSYINTIVNSISRVAAMSEIVSANNKMLEQQKADKKAISEKQVANNDAINTVIANQQKLADDAQALTTKQAELKAAELSLAAEKEGEKASLLEQKAAAEAEARAAAVAEAAYKEKRASQQQSVLASANTNLTAQVQAVSESAA |
9 | 5xg2A | 0.10 | 0.09 | 3.13 | 0.72 | CNFpred | | RAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSISFELRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERERGELAKLRGRIERLERKRDKLKKALENEARELTEKIRAVEKEIAALREELSRV------------------------------- |
10 | 3tnuB | 0.18 | 0.09 | 2.78 | 0.48 | HHsearch-2 | | -------------------------------------------------------------------------------------TKHEISEMNRMIQRLRAE----IDNVKKQCANLQNAIADAEQRGELALKDARNKLAELEEALQKAKQDMARL------LREYQELM---NTKLALDVATYRKL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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