Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | GGYAGLYRWTMDALFGSRVSPSRKYKEFAQDDTNYKREGRRRVRSPESTIMRSNSWSGLDSGFYRRNDLLPPSIEEDMEVPRPIESSNSLLNSSRVYRRPEEQPTDTFAARRRRLGDDGEDHSIVLQSPQQDDPLISKLFQK |
1 | 6ahfC1 | 0.07 | 0.06 | 2.62 | 1.09 | SPARKS-K | | LQPIHI----LAAFIETPEDGSVPYLQYDYDLFKKVVNRNLVRIPQQQPAPAEITPSYALGKVLQDAAKIQKQQKDSFIAQDHILFALFNDSSIQQIFKEAQVDIEAIKQQALELRGNTRIDSRGADTNTPLE--------- |
2 | 3iykG | 0.12 | 0.10 | 3.51 | 1.02 | Neff-PPAS | | ---RHKSFHTNDQWVQWMMKDS---------MDAQPLKVGLDDQSRNVAHSLHNCVVKIDSKKADTYHVEPIEDASKGCLHTRTMMWNHLVRIETFHAAQEVKPTYDIVVHAERRDRSQPFRQSRHDPGEIK---------- |
3 | 5jcss | 0.04 | 0.04 | 2.13 | 1.07 | SPARKS-K | | NVSQQTETGDLLGGYKPKTVAVPIQENFETLATFSLKKNEKFHKMLHRCF-NKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIESLVKTIRAGEWLLLDEVNL |
4 | 3j65r2 | 0.10 | 0.08 | 3.15 | 0.42 | FFAS-3D | | ------------------LKITEKANGAEENSVDLEETEEEEDDGLIRERVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGD |
5 | 3l4gC | 0.14 | 0.11 | 3.63 | 0.40 | HHpred | | -----SSFWNFDALFQPQQHPARD-----QHDTFF-LRDPAEAPMDYSQGYGSQGYKYWKLSARALYRLAQKKFTPVKFSIDRRNDATHLAEDHGLTLGHLMGVLREFFTKL-------GITQLRFKPA------------- |
6 | 2l3oA | 0.12 | 0.10 | 3.50 | 0.66 | MUSTER | | -----------DT---HRLTRTLNCSSIVKEIIGKLPEPELKTDDEGPSLRNKSFRRVNLSKFVESQGEVDPEDRYVIKSNQKLNACLPTSANDSALPGVFIRDLDDFRKKLRFYMVHLNDLETVLTSPASGS--------- |
7 | 1js4A | 0.15 | 0.04 | 1.18 | 0.51 | CNFpred | | ----AFVALVYAKVIDDP-VRKQRYHDFAVRQINYALG-------------------------------------------------------------------------------------------------------- |
8 | 2pffB | 0.16 | 0.15 | 5.15 | 0.51 | HHsearch-2 | | TQGLNILEWLRSYLKGATGHSQGLVTAIAETDSWSFFVSVRKAAYPNTNNVPSPMLSISNLTQEQVQDHLPAGKQVEISLVNGVSGPPQSLYRKAKAPSGLDQSRIPFSERKLKF----SNRFLPVASPFHSHDLINKDLVK |
9 | 6nuwJ | 0.08 | 0.08 | 3.05 | 0.95 | Neff-PPAS | | ---QLLHNYVSDSLLTTLISFQEFKQQLQSYTSDEQQLQHWYELLQARARVTSELEARIKQFFITLRSRLLRFLESSLSLETLIDALYKINDLLQQRLQILDDAIQEKTSELAEFENMVRSPS---AGDNAIPGLLQIIQSY |
10 | 5ed7A1 | 0.22 | 0.09 | 2.89 | 0.49 | HHsearch | | EEAVRGFREQAWKLFGSGLSPLQKLAYYI-------IHRE----------RRLSPFPALVGRYTQRHGLYPRPDDP------------------------------------------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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