Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | DIFDCLEGAARRAPSSVAHTSMSDNGGFKQPLAPSGRSPVEGLGRAHRSPASPRVPRVPDYVAHPERWTKYSLEDVTEVSEQSNQAAALAFLGSQSLAAPTDCVSSFNQDPSSCGE |
1 | 1n5bA | 0.10 | 0.09 | 3.48 | 0.97 | SPARKS-K | | -SFQAITQLFQQLSLSIPDTIEPGEFACHITEHPVGQTLPSLDNNNESHNIFSQDILKPILSWDEVGWNRQPLNNLDNNSLYTQLEMLVQGAERLQTSSLISPPRSFS-------- |
2 | 2xd8A | 0.12 | 0.11 | 3.99 | 0.43 | FFAS-3D | | EMFKGFQHET-IARDLVTKRTLKNGKSLQFIYTGRMTSSFHTPGTPILGNADKAPPVAETIVMDDLLISSAFVYDLDETAEKYDRLIFRSITRGARSASPVSATNFVEPGGTQ--- |
3 | 4k3fA2 | 0.13 | 0.05 | 1.78 | 0.26 | HHpred | | --------------------------------------------------------------AYSSKY--KKLDELPSPNDATNGGRALLLLDKAGVKDNKSITATPKD------- |
4 | 5tx1R | 0.16 | 0.16 | 5.18 | 0.93 | MUSTER | | GLFSPYLT-TRLPGWAGVRQNVMGSTVDGRPVLPANSSTMTYATVGNSSLDSTAAAAAAAAAMMPSSGSSPSVPSSIIAEEKLLALLAELEALSRQLAALTQQVSELREQQQQQNK |
5 | 4is4A | 0.19 | 0.04 | 1.39 | 0.35 | CNFpred | | --------------------------------------------------------------------TNYSTKSMREN---GGYEIIKKAIEKLGL------------------- |
6 | 3eccA | 0.12 | 0.11 | 3.92 | 0.33 | HHsearch-2 | | DTYHPKNRALLTIR-VFV-HN------FN-PE--EGKGLVGSPGVGKTHVAIKKGIRTKDLIFKDTNSPVLVLDDLGSELSDWQRELISYIITYRYNN-LKSTIITTNYSLQRSSV |
7 | 3iykG | 0.10 | 0.09 | 3.53 | 0.89 | Neff-PPAS | | ----GYDERRAVVESTRHKSFHTNDQWVQWMMKDSMDAQPLKVGLDDQSRNVACVVKIDSKKADTMSYHVEPIEDASKGCLHTRTMMWNHLVRIFHAAQEVAYTLKPTYDIVVHAE |
8 | 1rp4A | 0.13 | 0.13 | 4.47 | 0.62 | HHsearch | | NIRDDLSALNRACSVDVVDWDTLPE-YWQPENNDTKEADDDECKFLDQLCDNGKNAVLIDLTANPERFTGYGGKQIWSTGESLAKDAFYRLVSGFHASIGKEYLPLF-ARIGNFL- |
9 | 2mcdA | 0.12 | 0.10 | 3.63 | 0.86 | SP3 | | -----------MRGSHHHHHHGSVSFGAPSPLSSESEDEINYMTPPEQEAQPGALAALHAEGPLAGLPVTRSDARVLIFNEWEERKKSEPWLRDMSDKAIFRRYPHLR-------- |
10 | 5tx1R | 0.11 | 0.11 | 4.03 | 0.62 | PROSPECTOR2 | | MNGTGGAFEGGLFSPYLTTRLPGLPANSSTMTYATVGNSSLDSTAAAAAAAAAMTATRLASSYMPSSGSSPSVPSSIIAEEKLLALLAELEALSRQLAALTQQVSELREQQQQQNK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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