Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | PFKTKEPSPRIWKIQANLAINPAALLPTAAPQISGMKSVLPELGVPSSEPERIHSLESVPTLPGSGEAGVSFDLPAQADTLHSANKTRVKVRGKRRPQTRAARQLAAQESSEAEDMSIPRGFVAQLADG |
1 | 6e5oY | 0.07 | 0.06 | 2.60 | 1.39 | SPARKS-K | | RGFGRQGKRTFMTERQYTKMETAKLAYEGLTSKTYLSKTLAQYTSKTCSNCG-FTITYADMDVMLVRLKK-----TSDGWATTLN-NKELKAEYQ--ITYYNRYKRQTVSKWTKGRRDEALFLLKKRFS |
2 | 6etxG | 0.12 | 0.12 | 4.14 | 1.08 | MUSTER | | DFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWFFPEPAGGLWSIRPQ |
3 | 2kz7C | 0.19 | 0.11 | 3.49 | 1.15 | HHsearch-2 | | -----------------------------------------GS-----WGC----------VRQEKRSSGLIELPSEGRRLEHFTKLRPKRN-KKQQPTQAAVCTISQDGEQNGLMEGVDEFFTKKVTG |
4 | 4k0mC | 0.13 | 0.13 | 4.53 | 1.33 | Neff-PPAS | | ---KGEKIKEAEEAGADYVGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
5 | 3hgfC | 0.06 | 0.04 | 1.70 | 1.32 | SPARKS-K | | -------------------------------KKIENIVTKIDKKKYIYKKLLNEIAEIEKDKTSLEEVKMSYGKSLNK------------LFLEKIKKKSENMIKSMEKYIKDLDEIKEQSPKAEMN-- |
6 | 2o011 | 0.09 | 0.09 | 3.50 | 0.44 | FFAS-3D | | PLGLGEVPANLERYKSELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWGTLPTILHQRSMEKDPEKKKYPGGALEELKVKEIKNGRLLAFVGFCVQQSAYPGTGPLENLAT- |
7 | 2kz7C | 0.21 | 0.10 | 3.20 | 0.40 | HHpred | | -------------------------------------------------------------VRQEKRSSGLIELPSEGRRLEHFTKLRPKRN-KKQQPTQAAVCTISQDGEQNGLMGRVDEGVD----- |
8 | 5jcss | 0.15 | 0.14 | 4.68 | 0.95 | MUSTER | | P------KTVAVPIQEN----FETLF-NATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENAKKKKRRLNTHEKKLLLDKWADFNDSVKKFEAQSSSIENSFVFNFVEG |
9 | 2eyqA | 0.19 | 0.04 | 1.25 | 0.32 | CNFpred | | FRSAKEQTQILAEVKIDILIGTHKLL------------------------------------------------------------------------------------------------------- |
10 | 3lk3T | 0.26 | 0.09 | 2.88 | 0.98 | HHsearch-2 | | ---------------------------------------------------------------------IS-ELPSEGKKLEHFTKLRPKRN-KKQQPTQAAV------CRVDEGVDE-----FFTKKV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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