>PF15246 (307 residues) SPTIEEKVMLCIQENVERGQVQTKSTSVEAKPKPGPSFASWFGFRRSRLPALSSRKMDVS KTKVEKKDAKGLGFGNKQLKSERKKEKKKPELQCEIENELNRDTELADRPDSGLQSKNNL KTPQDVYGQMKFEPRNRPSPVTCSTKDTFMTELLNRVDKKAAQQTESGSNNVSCRSVLKG SSQGSCLTSSSISTQGNHKKNIKTKADMEIPKGSLIKKANENLQEDEEDTIADSAFQSHI IESNCQMRTLDSGIGTFPLPDSGNRSTGRYICQPESPEDTEPILSLQPALGAASSIRAQT LEREVPS |
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Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 | | | | | | | | | | | | | | | | |||||||||||||
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Seq | SPTIEEKVMLCIQENVERGQVQTKSTSVEAKPKPGPSFASWFGFRRSRLPALSSRKMDVSKTKVEKKDAKGLGFGNKQLKSERKKEKKKPELQCEIENELNRDTELADRPDSGLQSKNNLKTPQDVYGQMKFEPRNRPSPVTCSTKDTFMTELLNRVDKKAAQQTESGSNNVSCRSVLKGSSQGSCLTSSSISTQGNHKKNIKTKADMEIPKGSLIKKANENLQEDEEDTIADSAFQSHIIESNCQMRTLDSGIGTFPLPDSGNRSTGRYICQPESPEDTEPILSLQPALGAASSIRAQTLEREVPS | |||||||||||||||||||
1 | 5jcss | 0.09 | 0.09 | 3.32 | 1.29 | SPARKS-K | DQLIQSSVYDSIFSEAADCFAG-AIGEFKALEPIIQAIGESLDIASSRISFLTQHVPTLENLDDSIKIGRAVLLKEKLNIQKKSMNSTLFAFTNHSLRLMEQISVCIQMTEPVLAKMLAKKTVINVSQQTDLLGGYKPKTVAVPIQENFETLFNATFSLKKNEKFHKMLHRCFNKNQWKNVVKLWNEAYKMAQSILKITNTENENENLLDKWADFNDSVKKFEAQSVEGSLVKTIRA-----------------GEWLLLDEVNLATADTLESISDLLTEPDSRSILLSEKGDAEPIKAHPDFRIFA | |||||||||||||
2 | 2atyA | 0.08 | 0.08 | 3.16 | 1.07 | MUSTER | STPIAV-------TVIRSGTFRLIGEKSLLCITKDKVDGTWDAPKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSACKTNFSMN--QANNMWGPTRLPTCVSVFPLEGSIEGRGGSELVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTVVVDISKDDPEVQDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKERVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKD--KVSLTCMITDFFPEDIGQPAENYKNTQPIMNTNESYFVYSKQKSNWEEGLHNHHTEKSLPG | |||||||||||||
3 | 2tmaA | 0.09 | 0.08 | 3.11 | 2.40 | Neff-PPAS | -----KKKMQMLKLDKENALDRAEQAEADKKAAEDRS-------------KQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIESRAQKDEEKMEIQEIQLKEAKHIAEDAD-RKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAE---------TRAEFAERSVTKLEKSIDDLEDELYAQKLKYKAISEELDHALNDMTS | |||||||||||||
4 | 5gaoE | 0.05 | 0.05 | 2.39 | 1.38 | PROSPECTOR2 | AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-----AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTKEKSNKK | |||||||||||||
5 | 5yfpB | 0.10 | 0.09 | 3.54 | 1.25 | SPARKS-K | FQNELNELSGHMISKIIHSQRLILQNNTNQDKSQGCVELSYYLKINQLFQIKDSEGLKSTVEPNKVNTISGTSYLNLNIIEMWLLILKYINDLWKICDQFIEFWEHIEKLDGTYQNSIINEKRK---ENILIGDSNIIESYQKSLILKEEQINEVRLKGEEFITSVSQNLISFFTSSQSSLPSSLKDITRSNKDSGSPLDYGFIPPNCEPILKFSTELAQLNITTNGITICRNTLISSTKLRDISNFYQLENWQVYETVTFSSKSQDSSKNLTFEYGVTQFPEIVTSFQAYEKLPIINGISVVSYPS | |||||||||||||
6 | 6nuwF | 0.12 | 0.06 | 2.17 | 0.54 | FFAS-3D | ---LEDSVFEKYEKEMNQMTHGDNNEVKRIYSKKERLLEIILTLRQAKFPDIE---YIYSKRQFIQNRY------SQELQNNERLEAILSREQNLLEETRKLCMNLKTNNKKRLTEKLIQKDVRNDSHELNLMLNDPIKSTADVRLDKEVLSLLPSLKEYTKKSKE--------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 3jb4C | 0.10 | 0.06 | 2.07 | 0.35 | HHpred | --------------------------------TVRKTKTSKFKWVRNKIDIAE-G-PGA------------MNIANV----LSTTGGQTIALVG---ERAFYDPVRCKDLMEIARMPSVFLGESDGRGYFTWSHTISPVNWVFDENMPNLRLFSSCYNYW------RGSF--VIKLTVYASLRMAFFPNREGAY---------TQDDAQNAIFVVC-----DIGLNNTFEMTIP-----YTWG-NWMRPTRNSLGHLRI------------------------------------------------ | |||||||||||||
8 | 3txaA1 | 0.09 | 0.09 | 3.36 | 0.98 | MUSTER | NSQRALKAGEAVEKLIDKITSNKDNASTIFDGTEATVSKGVADQNGKALNDSVSWDYHKTTFTATTHNYSYLNLTNDANEVNILKSRIPKEAEHINGDRTLYQTQKA--LMKANEILETQSSNARKKLVPTMSYAINFNPYISTSYQNQFNSFLNKIPDRSGILQEDFIINGDDYQIVKGDGESFKLFSDRKVPVTGGTTQAAYRVPLSVMSNEGYAINSGYIYLYWRDYNWVYPFDPKTKKVSATKQIKTHGEPTTLYFNGNIRPKGYDI-GVNGDPGATPLEAEKFSSKTENYTNVDDTN-KIYD | |||||||||||||
9 | 2cbiA | 0.09 | 0.03 | 1.12 | 0.49 | CNFpred | --EELYGEFARMEEACNNLKANLPEVALEECSRQLDELITLAQGDKASLDMIVAQLN------------------------------EDTEAYESAKEIAQNKLNTALSSFAVISEK---------------------------VAQSFIQEALSFDLTLI-------------------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
10 | 2pffB | 0.18 | 0.18 | 5.91 | 0.53 | HHsearch-2 | SHGSLEHVLLASFFIASQLQEQFNKILPEPTETTPAELVGKFLGYVSSLVEPS-KVGQFDQCYLEGNDIHLLQENDTTLVKTKRIMAKRPFDKFDYFEELRDLYTLSELIRTTLDAEKVFTQGLNILEWL-ENPSNTPLSIPISCPLIGVIQLAHYVVGVAAETDSWESFFVSVRKACYEAYPNTSLPPLSISTQEQVQTNSHAGKQVEIPPQSLNLLRKAKAPSGLDFLPVASPFHSHLLASDLINKDLVKNNVSFQIPVYDTFDDLRVLSGSIS--ERIVDCIIRLPETTTQFKATHILDFGPGG | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |