Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | HDLKDGSEDDVQSMQSSSTYLRGQNAPLDAQTLAERMDKRRKASEYHNAIKKQLHEREMIRKWELERHRQEEQIEEERLRRQKQMDQERAEYERRQQLEREEAQQKKQQAMLDAIAKAEVAAQMEKQQKRKKPQPQPQKEH |
1 | 5t4oI | 0.06 | 0.06 | 2.53 | 1.20 | SPARKS-K | | ILGQAIAFVLFVLFAMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSD |
2 | 2otoB | 0.15 | 0.11 | 3.60 | 1.28 | FFAS-3D | | ----------------------------DFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEK----------- |
3 | 2otoB | 0.10 | 0.10 | 3.65 | 1.38 | MUSTER | | -AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE--- |
4 | 2otoB | 0.10 | 0.10 | 3.65 | 1.52 | Neff-PPAS | | -AANNPAIQNIRLRHENKDLKARLENAEVAGRDFKRAEELEKAKQALEDQRKDLETKLKELQQDYDLAKESTSWDRQRLEKELEEKKEALELAIDQASRDYHRATALEKELEEKKKALELAIDQASQDYNRANVLEKE--- |
5 | 3na7A1 | 0.04 | 0.03 | 1.57 | 1.16 | SPARKS-K | | ---------------------LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSESLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL------ |
6 | 3o0zA | 0.18 | 0.14 | 4.62 | 1.18 | FFAS-3D | | -----------------------------QKQLEEANDLLRTESDTAVRLRKSHTESKSISQLESLNRELQEENSKSQTDKDYYQLQAILEAERRDRGHDSGDLQARITSLQEEVKHKHNLEKVEGERKEAQDLNHSEKE- |
7 | 6gmhQ | 0.14 | 0.11 | 3.88 | 0.37 | HHpred | | ---HVAPSDTVLMFVLLTSVLKDEKSNLKEVAVKELELLAATEARQCSDLLSQAQY-----HVARARKQDEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKTKNIL--------------- |
8 | 3na7A1 | 0.06 | 0.05 | 2.18 | 1.25 | MUSTER | | --------------------LEPLIREK-RKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL-- |
9 | 5hmoA | 0.17 | 0.13 | 4.43 | 0.45 | CNFpred | | -----------------------------AEKRAEEEKRKREEEEKRKREEEERERERERREAELRAQQEEAARKQRELEALQQESQRAAELSRELEKQKENKQVEEILRLEKEIEDLQRMKERQELSLTEASLQKLQQLR |
10 | 6gmhQ | 0.14 | 0.12 | 4.11 | 0.77 | HHsearch-2 | | KARHVAPSDTVLMFVLQTSVLKDEKSNLKENAVKELEL-AHRYARQCSDLLSQAQY-----HVARARKQDEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEK------TKNILMFT------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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