Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | AKAKAAVESSKQSGSKLEPERNKKEEEKAAKQTKKSVHDVVWDEQGMTWEVYGASLDPESLGFAIQSHLQCKIKEHEKKIMARTTFRKSMSGGASDSPLGRKSKRRQANVFRSMFQNVRRPNCCVRPSP |
1 | 2mq8A | 0.11 | 0.09 | 3.34 | 0.78 | SPARKS-K | | EVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNTITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH---------------------- |
2 | 3zey4 | 0.11 | 0.11 | 3.88 | 0.49 | FFAS-3D | | PHLRKLRKLKRANPSQEEESVELEGSHKTLRAQLPRFRTSSSPRHKKTAMIILYPLRFIMLVRKIQRTLTAELEKRFPGNIVVLVAQRKITKRPNDVYKLQQVQRSRTAVFENILNDLIYPC------- |
3 | 3cynC | 0.15 | 0.09 | 3.12 | 0.22 | HHpred | | --PSKEVESFARKYGVTFPIFHKIKSEGEPARSKKEPRKYLVNPEGQVVKFWRPEEPIEVIRPDIAALVRQVIIKKKEDL------------------------------------------------- |
4 | 1w9rA | 0.12 | 0.11 | 3.84 | 0.70 | MUSTER | | HMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYKTLELEIAESDVEVKKAELELVKEEAKEPRN-EEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAA---------EEDK--VKEKP |
5 | 5fmgM | 0.16 | 0.05 | 1.80 | 0.40 | CNFpred | | -----------------------------------------------IIGSSGMQSDIKTLHSLLQKKIQLFVLEHSHYP-----------------------------DIHVIARLLC---------- |
6 | 6i0yE | 0.11 | 0.06 | 2.26 | 0.46 | HHsearch-2 | | ----------------------------------------------MELVLKDLTVSETTFGRDFNEALVHQVVVAYAAGARQGTTRAEVTGSGKKPWRQKGTGR-------ARSGSIKSPIWRSGGFA |
7 | 1w9rA | 0.14 | 0.12 | 4.25 | 1.01 | Neff-PPAS | | -------------GSHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNTYTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEKVKEKP |
8 | 3btvB3 | 0.13 | 0.09 | 3.22 | 0.39 | HHsearch | | LRAKELISQGYIG----------------DI---NSIEIAKKFTKNLVIDIHGTKRDLKLEGD--------EI--------SNLVLYYSGYDGKEVYHLRNY-NAIVGNLYQSIS-DFHFNKKIPELP- |
9 | 3o0hA2 | 0.14 | 0.11 | 3.69 | 0.69 | SP3 | | EDALHRYKRVEIYRTVFRP----MRNVLSGSPEKMFMKLVVDGESR---IVVGAHVIAQLIGISLKGKL--TKDIFDKTMAVHPTMSEELVTMYKPSYVYENGEKLD---------------------- |
10 | 1w9rA | 0.05 | 0.05 | 2.13 | 0.49 | PROSPECTOR2 | | GSHMPEKKVAEAEKKVEEAKKKAEDQKEEDRRNYPTNT----------------YKTLELEIAESDVEVKKAELELVKEEAKEPRNEEKVKQAKAEVESKKAEATRLEKIKTDRKKAEEEAKRKAAEKP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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