Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | MAPKKRASGPPAKAGETRKRKSSSEASPSTPKKMPKVGKRGKAGPGGRGGKKHAAGKKMAAVGAPEAGSGPAPPGPSQPPSQELPPCKVPVKEEPVGEPDPLSQETQLEDPLSQETQLEEPLSDVMTVSTSSEPLSDVMTFE |
1 | 6em5m | 0.11 | 0.11 | 3.84 | 1.84 | SPARKS-K | | RNEQTDDSINPEPLIDWFTRHEEVMPLTAVPEPKRRFVPSMKIVRAIREGRIIPPKKLKEMKEKEKIENYQYDLWGDSTETNDHVMH--LRAPKLPPPTNEESYNPPEEYLLSPEEKEENTEYSERERNFIPQKYSALRKVP |
2 | 1r5sA | 0.18 | 0.17 | 5.48 | 1.39 | MUSTER | | LGSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPG-YKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRMGQAGS----TISNSHAQPFDFPDDNQNAKKVAAGHELQPLAIVDQR-----PSSRASS-RASSRPRPDDLEI- |
3 | 1r5sA | 0.15 | 0.13 | 4.53 | 1.84 | Neff-PPAS | | PLGSPSKDCGSPKYAYFNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNYNKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDPDDNQNAKKVAAGHELQPLAIVDQRPSSRASS-----------RASSRPRPDDLEI- |
4 | 1mv3A | 0.07 | 0.07 | 2.90 | 1.16 | PROSPECTOR2 | | DGSPAATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFEDTFVPEISVTTPSQPAEASEVAGGTQPAAGAQEPGETAASEAASSSLPAVVVETFPATVNGTVEGGSGAGRLDLPPGFP |
5 | 4nl6A | 0.16 | 0.15 | 5.15 | 1.72 | SPARKS-K | | KAYDKAVASFKHALKNGDICETSGKPKTTPKRKPAKKNKSQKKNTAASLQQW----KVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGNLSDLLSPICEVANNIEQNAQENENESQSTDESENSRSPGNKSDNIKPK |
6 | 2k7mA | 0.11 | 0.08 | 2.81 | 0.56 | FFAS-3D | | -GPLGQGLTPPPDFNQCLKNSPDEKFSDFSNNMGSRKNPDPLATEEVPNQEQIPEEGFIHTQYGQKPEQPSGASAGHRFPQGYHSDKRRLSKASSKARSDDLS--------------------------------------- |
7 | 6ehzA | 0.41 | 0.08 | 2.28 | 0.22 | HHpred | | -------------------------------RREEKVGKKEKIGKKKRQKKRKAAQKR------------------------------------------------------------------------------------ |
8 | 1jvrA | 0.10 | 0.09 | 3.37 | 1.20 | MUSTER | | ------------HMGQIHGLSPTPIPKAPRGLSTHHWLNFLQAAYRLQPGPSDFDFQQKLALKTPIWLNPIDYSLLASLIPKGYPGRVVEIVKNQVSPSAPAAPVPTPICPTTTPPPPPPPSPEAHVPPPYVEPTTTQCF-- |
9 | 5c9nA | 0.20 | 0.06 | 2.03 | 0.89 | CNFpred | | -------------------------------------------------------------------------------------------------LSSQLYRNKQLQDTLVQKEEELARLHEENNHLRQYLNSALVKCEE |
10 | 5o603 | 0.32 | 0.05 | 1.49 | 0.69 | HHsearch-2 | | ---------------------------------------------AKRGRKKRDRKHSKANGKRPNA--------------------------------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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