Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | PSRRPSCYKRALKDHDCHNIPEGMENLRQIDDGLQDHFWEGKGCEVICYCNLNELLCCPKDIFFGPKISFVIPCNS |
1 | 4mi7A | 0.19 | 0.18 | 5.96 | 0.70 | SPARKS-K | | -GIDIIECENLLKEMNVQKIPESKEALQVFNSTVEDDFESQNHGPLMLIRPSSECLECIVGYDSEVKKVLIYDSNT |
2 | 5xxuH | 0.11 | 0.11 | 3.83 | 0.33 | FFAS-3D | | PTEIENEVAKCLFDIETSSQSDLKGDVRHLVISSVKEVEQGRKKAFVVFVPHAVYQKTVKKIQLKKHVVLVAQRT- |
3 | 6ghxA1 | 0.17 | 0.12 | 3.91 | 0.24 | HHpred | | ----YDYYKNVHNRLSYDGNNAAIRSSVHYSQGYNNAFWNGS--QMV-YGDGD-------GQTFIPLS-------- |
4 | 3iaaA | 0.15 | 0.14 | 4.88 | 0.67 | MUSTER | | EHYSFSQDVTLAGTIDPLDLPVFRDTLRDLEHGLSRSVVDNHVEQLNLVFVPKAFQIAGDTF--DDRFVFVGPCFD |
5 | 3l2eA | 0.13 | 0.09 | 3.20 | 0.68 | CNFpred | | -----AVFSRFAR------------GLLEVERLMKEC-----GHGLMHNDRLGYICTCPTNMGTVVRASVHLRLAF |
6 | 2lxtC | 0.33 | 0.09 | 2.76 | 0.49 | HHsearch-2 | | LSRRP--YRKILNDLSSDAPG--VP--------------------------------------------------- |
7 | 2qfgA1 | 0.17 | 0.12 | 3.88 | 0.80 | Neff-PPAS | | ------------EFEDCNELPPRRNTEILTGSWSDQTYPEGTQAIYK---------CRPGYRSLGNV---IMVCRK |
8 | 2lxtC | 0.38 | 0.11 | 3.12 | 0.54 | HHsearch | | LSRRP--YRKILNDLSSDAP--GVP--------------------------------------------------- |
9 | 3i4tA2 | 0.22 | 0.21 | 6.63 | 0.74 | SP3 | | EHWRPSYYPKIKIDNNMHTINQCIEQLLEVEKEQHLGVYDACADQKIVYGKMKDL----LHYDFGAPHCLLIPAPQ |
10 | 4yptA1 | 0.09 | 0.08 | 3.03 | 0.36 | PROSPECTOR2 | | IQLDDDARVFVQANMD--CLPTDWRLVNKFDS------VDGVRTIKYFECPGGIFVSSQGKKFGYVQNGSFKEASA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|