Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | AGPGMTLQLKLKDSFLANVSYDSSFLEFLEKLCLLFHLPSGTNVTLHRAGCPHHVICRV |
1 | 2kanA | 0.16 | 0.15 | 5.10 | 0.90 | SPARKS-K | | AVRKIHVTVKFPSKFTVEVDRTETVSSLKDKIHIVENTPIK-RMQLYYSGADDVVFLKS |
2 | 2dajA | 0.15 | 0.14 | 4.59 | 0.42 | FFAS-3D | | SGGEKTVRVVINQKTIVRVSPHASLQELAPIICSKCEFDPLHTLLLKDYQSQEPL---- |
3 | 2mx2A | 0.12 | 0.12 | 4.15 | 0.34 | HHpred | | --KEKKIRITTNDGSMVTLKSSTTFFELQESIAREFNIPPY-LQCIRYGFPPKELMPPQ |
4 | 2bwfA | 0.24 | 0.24 | 7.41 | 0.95 | MUSTER | | LDMSLNIHIKSQDKWEVNVAPESTVLQFKEAINKANGIPSGKDQTVEQDGHSVHLVKSQ |
5 | 5mmnA | 0.16 | 0.15 | 5.10 | 0.55 | CNFpred | | EKTGTMVRFWPSLETFTNVT-EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY |
6 | 1vd2A | 0.10 | 0.10 | 3.75 | 0.34 | HHsearch-2 | | LGSQVRVKAYYRDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEECTVSSQL |
7 | 1z2mA2 | 0.10 | 0.10 | 3.73 | 0.94 | Neff-PPAS | | -DEPLSILVRNGRSSTYEVRLTQTVAHLKQQVSGLEGVQDDDQLPLGEYGLKPFMNLRL |
8 | 1vd2A | 0.09 | 0.08 | 3.27 | 0.50 | HHsearch | | LGSQVRVKAYYRDIMITHFEPSISFEGLCNEVRDMCSFDNEQLFTMKWIDEEGDPCSQ- |
9 | 2bwfA | 0.19 | 0.19 | 6.03 | 0.85 | SP3 | | LDMSLNIHIKSGQKWEVNVAPESTVLQFKEAINKANGIPVGKILTVESYHIQDHLVKSQ |
10 | 2jxxA | 0.12 | 0.12 | 4.20 | 0.36 | PROSPECTOR2 | | TETSQQLQLRVQGKEKHQTSRDSPLKTLMSHYEEAMGLSGRKLSFFFDGESGDLIEVWG |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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