Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | MGQKISHEDNQESKAETLVIREVFSQGVVYASQRLKDYLGFTDPQSKFQTATDTLNEIFLVNFISFCVEKGVEDHITTSKTTKQQSLLFGVDWIWTLLGVDKQIKLQIAVQALQLAELFHSESSPTKALDDCCWEATLADEHFQNRSRFEKLAEFCHLVGQDCLGLFIVFSVPGKPKDIRGVMLDSIAKEKQKCCLLGRNALRQFVMSTESFLSTKEMLEKCLSTRNGLKEVGNVYVNFL |
1 | 4qanA | 0.13 | 0.12 | 4.35 | 0.80 | SPARKS-K | | SLQKESEITSFSEEEEAVLYLSALKKAIDETALQTAEELP-GQLIDLPAPTSDPLTSAETKAYIEQFEELSIPEVLEIAEKKEQLAECLAAQEVSELEEQSYRLGFTAVQYIHSLKEACVQEEREAKKTYVLPNQLTGANAPISEKTPQRAVEQFIYAIEKGDLTRALAFATTESSQDTS---PELLKKQGEYAKELKTLY---GFLGTEDARKSEEQLNKLRGKTEENTETVKQYAGLY |
2 | 1xnxA | 0.15 | 0.12 | 4.23 | 0.65 | FFAS-3D | | -------QLNQQQKELVQILLGAHTRHVGPLFDQFVQFKPPAYLFMHHRPFQPRGPVLPLLTHFADINTFMVQQIIKFTKDLPDQISLL--------------KGAAVEILHISLNTTFCLQTE-NFFCGPLCYKMEDAVHAGFQYEFLESILHFHKNLKGLLMAATALFSPDTQREEI-----DQLQEEM-------ALILNNHIMEQQSRLQSRFLYAKLMGLLADLRSINNAYSYEL |
3 | 3ksyA2 | 0.15 | 0.05 | 1.54 | 0.32 | HHpred | | ---------------------------------------------------------------------------------------------------------------------------------------------------------------EPDSE-ENIIFEENAGIPIIKAGTVIKLIERLTYHMYADPNFVRTFLTTYRSFCKPQELLSLIIERFEIPEPEP------- |
4 | 1xnxA | 0.14 | 0.12 | 4.25 | 0.56 | MUSTER | | ------LQLNQQQKELVQILLGAHTRHVGPLFDQFVQFKPPAYLFMHHRPFQPRGPVLPLLTHFADINTFMVQKFTKDRSLTMDQISLL---A------------VEILH--ISLNTTFCLQTENFFCGPLCYKMEDAVHAGFQYE-FLESILHFHKNLKGLEPEYVLMAATALFSPDRPGV-REEIDQLQEE-----ALILNNHIMEQQSRLQSRFLYAKLMGLLADLRSINNAYSYEL |
5 | 2h4mA | 0.16 | 0.12 | 4.03 | 0.79 | CNFpred | | ----------------LDVLANVYRELLPHILPLLKELLFHHE-------WVVKESGILVLGAIAEGCMQGMIP---------YLPELI--PHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYL------AYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPP--------------- |
6 | 2pffB | 0.14 | 0.14 | 4.82 | 0.94 | HHsearch-2 | | MAKRPFDKAVGEGNATDDYFEELVGDLIKFSAETLSELIRTTDAEKVFTQGLNILDKDYLLHYVVTAKLLGFTPGELSQGLVTAVAIAETDSWESFFVSVRKAITV-LFFIGVRCYEAYPNTSLPPSILEDSNNEGVPSPMLSISNLTQEQVVNKTNSAGKQVE-ISLVLVVSGPPQSLYGLNLTLRKAKAPSIPFSERKLSNRFLPHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVY |
7 | 5cwqA | 0.11 | 0.10 | 3.73 | 0.79 | Neff-PPAS | | --------------EELERESEEAERRLQEARKRSEEARE-RGDLKELAEALIEEARAVQELARVACERGNSEEAERASEKAQRVLEEARDDEVLALALIAIALAVLALAEVACCRGNSEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRG-----NKEEAERAYEDARRVEEEARKVKESAEEQGDSEVLAEEAEQLAREARRHVQECRGGWLEHH |
8 | 1x4qA | 0.24 | 0.09 | 2.73 | 0.42 | HHsearch | | -GSSGSSGMAL-SKRE----LDELK---PWIEKTVKRVLGFSEPT--------------VVTAALNCVGKGMDKKKAADHLKPDSTLRF-VDKLFEAVEERSSRH-----------------SSGPS---SG------------------------------------------------------------------------------------------------------------ |
9 | 5oqrA | 0.08 | 0.07 | 2.80 | 0.71 | SP3 | | ADNNLLELLERLDVSNNSDVAVLAIKKFFDVRVDSLSQLEFPEQFWL---ELTAESSLLARTFNEICIEKNYTDLLDKPEVVQLTYYIERQ--YVSLRDKSSYDESCFIIEQLLYIGLSQDMVDEIGRRKLLKSLTNSLSTMALPDSLISLHIELLRKLCSS-------------ENDFCSLLVEIITEVFEQGH---AFNELRCLS------YVQCLFENITSSLNENLYMVDMLKTLI |
10 | 5cwpA | 0.10 | 0.09 | 3.26 | 0.76 | PROSPECTOR2 | | MS---------SDEEEARELIERAKEAAERAQEAAERT-----GDPRVRELARELKRLAQEAAEEVKRDPSSSDVNEALKLIVEAIEAAVRALEAAERTGDPEVRRELVRLAVEAAEEVQRNPSSSDVNEALKLIVEAIEAAVRALEAAERVRELARELVRLAVEAAEEVQRNPSSEEVNEALIQEAVESLREAEESGDPEKREKAR--ERVREAVERAEEVQRDPSGWLE--------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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